Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq16 111 1e-19 seq136 96.9 3e-15 seq111 87.8 2e-12 >seq16 Length=163030 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | |||||| ||||||| ||||| || Sbjct 133922 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 133981 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || ||||| || || || Sbjct 133982 GACACTATCGACAACGTCAAGACCAAGATTCA-AGACAAGGAGGGTATTCCTCCGGATCA 134040 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || ||||| || || || |||| ||||| | || ||||| Sbjct 134041 ACAGCGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAA 134100 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| ||||| || ||||| || || Sbjct 134101 CATCCAAAAAGAGTCCACACTTCATTTGGTCCT 134133 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || |||||| |||| || || ||||||| |||| || ||||| || ||||| ||||| Sbjct 133250 GTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA- 133308 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| ||||| || || || || || ||||||||||| | | Sbjct 133309 -CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCA 133367 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 | || |||||||| ||| | || || | ||||| | ||||||||| || || || | Sbjct 133368 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGG 133427 Query 25189 AATCCACGCTACATTTAGTGCT 25210 | ||||| || || || || || Sbjct 133428 AGTCCACACTGCACTTGGTCCT 133449 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | |||||| ||||||| ||||| || Sbjct 128570 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 128511 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || || || || || || Sbjct 128510 GACACTATCGACAACGTCAAGACCAAGATTCA-GGACAAGGAGGGCATCCCTCCGGATCA 128452 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || |||||||| || | || || | || || || || ||||| Sbjct 128451 GCAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGAACATTGTCGGACTACAA 128392 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || || || || || || || || Sbjct 128391 CATTCAAAAGGAGTCAACTCTGCACTTGGTTCT 128359 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | |||||| ||||||| ||||| || Sbjct 133466 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCC 133525 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || || || || ||||| Sbjct 133526 GACACTATCGACAACGTCAAGACCAAGATTCA-GGACAAGGAGGGCATCCCTCCGGACCA 133584 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || |||||||| || | ||||| | || || | || ||||| Sbjct 133585 ACAACGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAA 133644 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| | ||||| || || Sbjct 133645 CATCCAGAAGGAGTCCACATTGCATTTGGTTCT 133677 >seq136 Length=51868 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/200 (71%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | ||||| || | ||||| |||| || |||||||| ||| | ||||| Sbjct 49393 GTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGAC 49452 Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130 | | ||| || ||| ||||| ||||| ||||| || ||||||||||| | || Sbjct 49453 GCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCC-CCGGACCAACAGCGTCTCATC 49511 Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190 || |||||||| || | || || | ||||||| | ||| ||||| || || || || Sbjct 49512 TTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAG 49571 Query 25191 TCCACGCTACATTTAGTGCT 25210 ||||| || || || || || Sbjct 49572 TCCACTCTTCACTTGGTCCT 49591 >seq111 Length=618870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| || ||||| || Sbjct 410616 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 410675 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || || || || |||||| Sbjct 410676 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 410735 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || |||||||| || | ||||| | || || | ||| ||||| Sbjct 410736 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 410795 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || |||||||||||||| || || Sbjct 410796 ATCCAAAAAGAATCCACCCTCCA 410818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325517843050