Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq47 100 6e-16 seq261 96.9 7e-15 seq22 95.1 2e-14 >seq47 Length=84389 Score = 100 bits (110), Expect = 6e-16 Identities = 284/430 (66%), Gaps = 11/430 (3%) Strand=Plus/Minus Query 251566 AAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCA 251625 ||||| || | |||||| | ||| ||||| |||||||||||||||||| |||||||| Sbjct 59468 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 59409 Query 251626 TTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATAC 251685 ||||| ||||| | || || ||||| | | || || || ||||| || | ||| Sbjct 59408 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCG-TCAGCGACAAATTCGATGTAC 59350 Query 251686 TGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAAT 251745 || | ||| ||| | ||||||||| |||| ||| |||| || || | ||| Sbjct 59349 TGGCTCATAAGTCGTGCGTTCATGCCGATCAATGAACAGGGAAGAGCATCGGTCAGGAAA 59290 Query 251746 TCCTTTTCGTTGGCAACTGCCTCCTCCACAATT-GC----CTTCACCTGTGCCAGAGACA 251800 ||| || ||| || | ||| | | || || | || | | | | | | Sbjct 59289 GCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGGT--GCGGCC 59232 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 |||| || | | || || ||| || || | || |||||||||||||| | Sbjct 59231 GCTTCTTGAGGTGGCTGAAGAGCA--AGCAAGCAAAGTCGGTG-TGCAGACCCTCGTCTC 59175 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 | ||||||| ||||||||| | || || ||||| | ||||| ||| ||||||||| Sbjct 59174 GGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGA 59115 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 |||| | | || || || ||||| | | |||||| || | | ||||| |||| Sbjct 59114 AGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAAGGCAACCAGGC 59055 Query 251981 GCTCAGCAAA 251990 |||| ||||| Sbjct 59054 GCTCGGCAAA 59045 >seq261 Length=24592 Score = 96.9 bits (106), Expect = 7e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| || || |||| || || ||| || || ||||| Sbjct 12364 GGTCCCAACGGTTCCGGCAAGTCGACGCTCGTCAAGCTCATGGTTGGTGACACAGAGGCC 12305 Query 280239 ACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGC 280297 | ||| ||| | | |||||||| |||||| || || | |||||||| || ||||| Sbjct 12304 AA-GAGTGGTGAGGTGTGGAAGCACCCCAACTTGGTTATCGGATACGTCGCCCAACACGC 12246 Query 280298 TTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 ||||||||||||||| | ||| |||||| ||| ||| | | ||||| |||||| || Sbjct 12245 TTTCCACCACATCGACCAGCACTTGGACAAGACCCCTCTCGACTACATGTTGTGGCGATA 12186 Score = 95.1 bits (104), Expect = 2e-14 Identities = 368/570 (65%), Gaps = 20/570 (4%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| |||| ||||| | ||||| ||||| || |||| |||||||| || ||| Sbjct 13195 GGTGAGGACTTGTGCAACTGTCAGTTCTCTCTCGCCTACGGTGCCAAGATTCTTCTCAAC 13136 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | |||||||||| |||| || |||||| || | || || | Sbjct 13135 ACCGCCACTCTCCGCCTCAAGCGTGGTCACCGTTACGGTCTCTGTGGCCGTAACGGTTCC 13076 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || |||||||||||| ||||||||| | || || || ||| | Sbjct 13075 GGCAAGTCTACCCTCATGCGCGCCATTCAGAACGGTCAGGTCGAGGGCTTCCCTTCGCCC 13016 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAG--CA 279582 ||||| | ||| ||| || |||||||| |||| | | ||| ||| || Sbjct 13015 GACGAGGTTCGCACATGGTACGTCGAGCACGATCTCGA-TGGT-TCTGAGGGAGAGATGT 12958 Query 279583 CTGTGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAA 279642 | | || |||| | | | | | ||| | | | | | ||||| || || Sbjct 12957 CCATTTTGGACTACATCATGACCGACGACCGCCT------CAGCGTCTCTCGGGAAGAGG 12904 Query 279643 TCATCCAGAAACTGGAGGCCAATGGTTTTGATGAA---AGAATGCGTAATCTGCCAGTAG 279699 | || | || | || | || || || ||| || | | |||| ||| | | Sbjct 12903 CCGTCAGCACTCTTGCGGAGATGGGCTTCGACGAAGTTCGACAGGG--ATCTCCCA-TCG 12847 Query 279700 GTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG 279759 || || || ||||| |||||||||||||| || ||| | || ||| | || | | Sbjct 12846 CCTCCCTCTCTGGTGGCTGGAAGATGAAGCTCGCTCTCGCCCGTGCCGTGCTCTTCAAGG 12787 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 |||| | || || || |||||||| ||||||||| ||||| | |||| | || ||| Sbjct 12786 CCGACATTCTCCTCCTCGATGAGCCCACCAACCACTTGGACGTCGTCAACATCGCTTGGA 12727 Query 279820 TAGTGTCCTACCTAACCA--GTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTC 279877 | |||||| |||| |||| | |||| | | || ||||||| || |||||||| Sbjct 12726 TCACCAACTACCTCACCAACGTCTCA--AATGCTACCGCCATCATTGTGTCGCACGACTC 12669 Query 279878 TGGCTTCCTAGATGCCGTGTGCTCTGCCAT 279907 | ||||| || ||| ||| | | ||| Sbjct 12668 TCAATTCCTCGACAACGTCTGCACGGACAT 12639 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||| || | ||||| ||| | ||| ||| || ||||| ||||| ||||||||| Sbjct 11781 GGTCTCGAGCGTGAGTTCACATCGCACAACACCATGCGTGGTCTCTCTGGTGGCCAGAAG 11722 Query 280740 GTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAG 280799 ||||| |||| |||| || || |||| | || ||| | |||| ||||||||| Sbjct 11721 GTCAAGATTGTGCTCGGTGCCGCAACATGGCGTAAGCCCCACATTGTCGTCCTCGACGAG 11662 Query 280800 CCTACCAACTATCTGGACCGCGAGAGCCTG--GGCGCTC 280836 || ||||||| ||||||| ||| |||| ||||||| Sbjct 11661 CCCACCAACTTCTTGGACCGTGAGTCCCTGGCGGCGCTC 11623 >seq22 Length=350823 Score = 95.1 bits (104), Expect = 2e-14 Identities = 172/246 (70%), Gaps = 12/246 (5%) Strand=Plus/Plus Query 293127 GACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGA 293186 || ||||||||| || || ||||| | ||| || | |||| |||||||||||| Sbjct 65407 GATAAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACAC 65466 Query 293187 TGTCTTGTACACTGCCTTGACATCAGG--ATGAATGCCAATAACCTTCTGGATAGACCCT 293244 ||||||||||| ||||||| || || ||||||| || ||||| || || || Sbjct 65467 TGTCTTGTACAGTGCCTTG--ATGCGGTCGGGAATGCCGGGCACGTTCTGAATCGAGCCG 65524 Query 293245 CCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCC---CACGAGCAATGAG 293300 |||| ||| || || |||||||||| |||| ||| || || | ||| || || Sbjct 65525 CCGTGGGCTATGATGCGGTTCTTCATCTGCTCGTTCCACAGACCTTGCTCGA-CA---AG 65580 Query 293301 CTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTA 293360 ||| || | || ||| |||||| || ||||||| || ||||| || ||| |||| Sbjct 65581 CTCACGCAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTA 65640 Query 293361 AATGTT 293366 || ||| Sbjct 65641 AAGGTT 65646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830610495270