Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq22 453 2e-122 seq47 242 7e-59 >seq22 Length=350823 Score = 453 bits (502), Expect = 2e-122 Identities = 1149/1722 (67%), Gaps = 63/1722 (4%) Strand=Plus/Plus Query 243902 AAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGT 243960 || ||| || || || || |||||| ||||| | ||||||| || ||||| || | || Sbjct 65410 AAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGT 65469 Query 243961 CTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTG 244020 |||||| | | ||||| | | ||||| | || | |||||| | |||||| ||| Sbjct 65470 CTTGTACAGTGCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGAATCGAGCCGCCGTG 65529 Query 244021 GACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGAC 244080 | | |||| || | ||| | ||||||||||| || |||| | ||| Sbjct 65530 GGCTATGATGCGGTTCTTCATCTGCTCGTTCCACAGACCTT---GCTCGACAAGCTCACG 65586 Query 244081 CAGGTGCCT---GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT 244137 ||| ||| ||| || || || ||||| || | ||||| || || ||| ||||| Sbjct 65587 CAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTT 65646 Query 244138 GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGG 244197 ||| || ||||| | || ||| || ||| || ||||| || || || || Sbjct 65647 GCTCGTGTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCGGTGGG 65706 Query 244198 CATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGG--ATGCGGAGTCTGAGC 244255 ||| || | | ||| || ||| | | ||||| | || ||| | | ||| | Sbjct 65707 CATAGGGGCGAGCAGGAGGGAGTTTCGGAGACCGTG--TGCGGCAATGTTGCGCTTGATC 65764 Query 244256 TCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGC 244315 ||| ||||||||| | | ||| || | | | || ||||| | ||| | ||| Sbjct 65765 TCGGCCCAGTCCCAGA-GTCCG-------CTGGGGGT-GACTCCCCAGAGGTCGTATTGC 65815 Query 244316 AGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCC 244375 ||| ||||||||| |||||||||||||| ||| ||||| ||| || ||| Sbjct 65816 AGCTCGCCCTTGCTGGTCGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCG 65875 Query 244376 AGCTTACAGCTCTCG-TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCAT 244434 |||| || | ||| ||||| ||||||| |||||| |||||||||||| |||| | Sbjct 65876 AGCTCGCA-CGATCGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAG 65934 Query 244435 GTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCC 244494 | ||||| | || | ||| | | ||||| |||||||| ||||||| || || Sbjct 65935 CTTCTTGGCCTCGGGGCTGTCGAACGCGTAACCCATGATCATGAAAGCGTCGGCGAGACC 65994 Query 244495 CTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGG 244554 | || ||||| |||||||| | ||| ||| ||||||| | | || ||||| || || Sbjct 65995 GTTGACTCCGATACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGG 66054 Query 244555 GTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT---GATCATGCGGACGACGTC 244611 ||| ||||| | ||||| | |||||||||||||| || | || || ||| Sbjct 66055 GTAGTAGTTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTG 66114 Query 244612 GGCCAGCAGCTGAAAGTCGTAC-TCGTAGGGATCCTCGGCGATGGTGATCCTCACA-AAC 244669 | ||| || |||||||| || | | | || | |||| | ||| || || Sbjct 66115 G---AGCTTCTTGAAGTCGTATGTCCTTGTGTTCGTGTGCGA-GTCGATGTGGACGTAAG 66170 Query 244670 TCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGG 244729 | | || || | ||||| ||||||||||| || ||||| |||| | |||||| Sbjct 66171 AAGGT-AGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCC 66229 Query 244730 ACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTG 244789 | ||||| ||||| ||||| ||||||||||||||| |||| || || || |||||| Sbjct 66230 ATGATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTG 66289 Query 244790 GCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGG 244849 |||| ||||||||||| |||||||| || || ||||| ||| || |||| Sbjct 66290 CGGTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGA 66349 Query 244850 ACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAG 244909 ||| || ||| || | |||||||| || | |||||| ||||| |||||| Sbjct 66350 ACGGCGTACCAAAGCTTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTAC 66409 Query 244910 CGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCC 244969 ||| || |||||||||||| ||| |||| || | || ||||||||| || Sbjct 66410 TTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCG 66469 Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 |||||||| || |||||| ||| | | ||| | || |||||| | ||| |||||| Sbjct 66470 GGGCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATC 66529 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCA 245087 || ||||| | |||||| || | || ||| | ||| ||| ||| ||||||||| | Sbjct 66530 CAAAGGGCGTAGAAGAGCTCACGGG--CTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 66587 Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147 | || | || || |||||||| |||||||||||| ||||||| |||| ||| || | Sbjct 66588 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTG 66647 Query 245148 GCCGCTTG-TTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAG 245202 | |||||| ||||| ||||| || | | | |||||| |||||||| ||| || Sbjct 66648 GACGCTTGTTTGCCACCCTGATCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAG 66703 Query 245203 GGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCT 245262 ||||||| || ||||||||| ||||| || || ||||| | ||| | || | Sbjct 66704 CATAGGCACGATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACG 66763 Query 245263 GAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 || | | |||| | ||| | || || || |||| ||| | ||||||| |||| Sbjct 66764 GATGCAGTGGATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTT 66823 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 || ||||| ||||| || || ||| ||||||| ||| ||| ||||| || || Sbjct 66824 GAGAGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGA 66883 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCG 245442 || || || ||||| | | | |||||| || |||||| ||| ||||| ||||| | Sbjct 66884 CATTTGAGGGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA-CT 66942 Query 245443 GCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCA 245501 || ||| | || ||| || | || |||||||| ||||||| ||| Sbjct 66943 TCTCCGACATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCC 67000 Query 245502 GGGCGCACCT--CATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCTTG-- 245557 | ||| || |||||| |||| ||||| |||| | | || | || ||| Sbjct 67001 GACAGCAACTCGCATGAGCATGTGTTGGGGGCGCTCG--GCGACCTT----GCCGTTGAT 67054 Query 245558 ----AGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 |||| |||||||||||||| |||||||| || ||||| Sbjct 67055 GCGCAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 67096 >seq47 Length=84389 Score = 242 bits (268), Expect = 7e-59 Identities = 414/588 (70%), Gaps = 12/588 (2%) Strand=Plus/Plus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| || || || |||| ||||| | || |||| Sbjct 58889 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 58948 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | || |||||||| || ||| | ||||| | ||||| || Sbjct 58949 CAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAG 59008 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 ||||| || ||||||| | ||| | || || | |||| | ||||| |||||| Sbjct 59009 TGGGCCCTGCGCTGGATCAACGACGAAGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTT 59068 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | ||||| ||||| ||||||||||| ||| | |||||||||||||||||||||||| || Sbjct 59069 GCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAG 59128 Query 42777 -AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 ||| || |||||||| ||||||||||| ||||| ||||||||| | |||||||| || Sbjct 59129 CGTGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCT 59187 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCGAAGG 42894 ||| | |||||||| ||| | || ||| |||||||||| | | ||| | | | Sbjct 59188 GCACACCGACTTTGCTTGCTTGCTCTTC---AGCCACCTCAAGAAGCGGCCGCACCCCGA 59244 Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954 | | || | | |||||| | ||| | || || ||| ||| ||||| || | Sbjct 59245 TGTCGTTCTGCG-CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTGACCGATG 59303 Query 42955 CGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTCATGTGCAAGTACATCCAGTAC 43013 | || ||| || || ||||||||||| ||||| || ||| || |||||||| | | Sbjct 59304 CTCTTCCCTGTTCATTGATCGGCATGAACGCACGA-CTTATGAGCCAGTACATCGAATTT 59362 Query 43014 GTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCC 43072 ||||| ||| | || || || | ||| || | | ||||||| | | || Sbjct 59363 GTCGCTGACGA-CTGCTGGTAGCCCTCGGGAACGAGAAG-CACTACAACGCCACAAATCC 59420 Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 ||||||||| ||||||||||||||| || | |||||||| ||||| || Sbjct 59421 CTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 59468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333652007200