Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq111 147 5e-30 seq16 136 9e-27 seq136 122 2e-22 seq418 116 9e-21 seq124 86.0 1e-11 >seq111 Length=618870 Score = 147 bits (162), Expect = 5e-30 Identities = 176/238 (74%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| || | ||| |||||||||||| || ||||||| Sbjct 410842 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 410783 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || |||||||| | || || || |||||||| ||||| ||||| |||||| Sbjct 410782 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGG---TCTGGG 410726 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || | || ||||| || || | ||| || ||| Sbjct 410725 GGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCT 410666 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481 || ||||| ||||| ||||| || || || ||||||||||| |||||||| ||| ||| Sbjct 410665 ACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATGATGATAT 410608 >seq16 Length=163030 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||||||||| | || || | ||||| ||| ||||||||||| || ||||| Sbjct 134151 TGGCCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCA 134092 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| || || || || || || || |||||||||| ||||||||| Sbjct 134091 GAAAGGGTGCGGCCATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGA 134032 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || || || || || | || ||||| || |||| || || || Sbjct 134031 GGAATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCG 133972 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 133971 ACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 127 bits (140), Expect = 5e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | ||| | ||| || || ||||| || |||| Sbjct 133696 CATG-CCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGT 133638 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| || ||||||||||| | || || || |||||||||| || ||||| Sbjct 133637 CCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCG 133578 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||| || || | || ||||| || |||| ||| || | Sbjct 133577 GAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACT 133518 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 133517 CAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133466 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | |||| ||| || || ||||| || || || | Sbjct 133920 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 133861 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || |||||||| || ||||| || ||| Sbjct 133860 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 133801 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| |||||||| || || | || ||||| || Sbjct 133800 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACC 133741 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 133740 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133694 Score = 118 bits (130), Expect = 3e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || | ||||| ||| || ||||| || || ||||| Sbjct 127885 TGGCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCC 127944 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| || ||||| | || || || |||||||||| ||||| || Sbjct 127945 GAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGG 128004 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || |||| || || || || || | || ||||| Sbjct 128005 GGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCC 128064 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 128065 ACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || ||||| || || |||| Sbjct 128116 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 128175 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || |||||||||| || ||||| || Sbjct 128176 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 128235 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || ||||| |||| || ||||| || || | || |||| || Sbjct 128236 ATGCCCTCCTTGTCTTGGATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTC---TCG 128292 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 128293 ACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128342 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | | || || ||||| || | || || || |||||| Sbjct 128380 TCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 128439 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||| ||| ||||| || || || ||||| || || | || ||||| Sbjct 128440 ATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTG 128499 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || |||||||| ||||| ||||| ||||| || ||||||||| Sbjct 128500 TCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACG 128559 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 128560 AAGATCTGCAT 128570 Score = 95.1 bits (104), Expect = 3e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || ||||| ||||| || | ||| || || |||||| Sbjct 133428 TCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 133369 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||||||||| ||||| || || || || ||||| || | || || || Sbjct 133368 ATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG 133309 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||||||||| ||| Sbjct 133308 TCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 133249 >seq136 Length=51868 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 5/182 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| ||||| || | || || || |||||| Sbjct 49570 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 49511 Query 288343 ATCAGACGCTGTTGAGAATCTGGG--ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400 || ||||||||||| || ||| || ||||| || |||||||| || | || ||| Sbjct 49510 ATGAGACGCTGTTGG---TCCGGGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACGG 49454 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 || || || ||| ||| || || ||||| ||||||||||| ||||| || ||||||| Sbjct 49453 CGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTGA 49394 Query 288461 CG 288462 || Sbjct 49393 CG 49392 >seq418 Length=175290 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || ||||| | Sbjct 54856 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 54915 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || ||| Sbjct 54916 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 54975 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||||||||| | || ||| || || || ||| || || || Sbjct 54976 ATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACC 55035 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 55036 TCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 55082 >seq124 Length=57796 Score = 86.0 bits (94), Expect = 1e-11 Identities = 180/258 (70%), Gaps = 14/258 (5%) Strand=Plus/Plus Query 326078 TCGGTCATGATCATCACATGACCGTAACG-AAGCGAG-GACGTGTCTTTGTACACTTTAC 326135 || ||||||||||||| | ||||| || |||| |||| ||||| ||||| Sbjct 16717 TCCGTCATGATCATCAAACTTCCGTACCGCAAGCTCTCGACGGAA--TTGTAGACTTTTT 16774 Query 326136 CGGTTTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTT 326194 | |||||| |||||||| | ||||| | || |||| || | |||||| ||||| Sbjct 16775 GGTGTTGAAGCCCGAGAATCTCTTTGATGTTCT-TGATCTCCGCATTCTTCATGATG--- 16830 Query 326195 GCCACG---GATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATAT 326251 || || || || ||||||||||| | || ||||| || | ||||||||||| | Sbjct 16831 GCATCGTGCGAAGCTTCGCGGACGTTGAGCAGCTTTCCGCGCAACGGGAACACTCCCCAG 16890 Query 326252 CTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTC 326310 | || || ||||| ||||| ||||| ||| || || | | | || || || ||||| Sbjct 16891 TTGTCACGTCCGACGACGGAAAGCCCACCGACAGC-AGAGGCTTTGGCAGAGTCTCCCTC 16949 Query 326311 CGTCAGAATGAGAGTGCA 326328 ||| || || || ||||| Sbjct 16950 CGTAAGGATTAGCGTGCA 16967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179647296268660