Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq22 178 2e-39 seq47 120 4e-22 >seq22 Length=350823 Score = 178 bits (196), Expect = 2e-39 Identities = 499/758 (66%), Gaps = 20/758 (3%) Strand=Plus/Plus Query 114479 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 114538 || || || || |||| | ||||||| | | ||||||| || || ||||| |||| Sbjct 66188 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 66247 Query 114539 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 114598 || || | ||| |||||||| | ||||||||| || ||||| ||| || |||||| Sbjct 66248 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 66307 Query 114599 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATC 114657 ||||||||| | || | || |||||||| || | || ||||| || | ||| | | | Sbjct 66308 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 66367 Query 114658 GGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCT 114715 | | || | || || |||| || || ||||| ||||||||| |||||| || Sbjct 66368 TGGGCCTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 66424 Query 114716 TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGAC 114775 || ||||| || || | | || | ||| || || || | | ||||| | || ||| Sbjct 66425 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 66484 Query 114776 CATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG 114835 || | || || || || ||||||||||| | ||| |||||||| || || ||||| Sbjct 66485 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 66544 Query 114836 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 114895 || || || || | || || | || || || | | || | || || | | Sbjct 66545 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 66604 Query 114896 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-------ACC 114948 | || | |||||| || || | ||| | |||| | | ||| |||| || Sbjct 66605 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTTGCC 66661 Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008 | |||| | || || | || ||| || || ||||||||||| || | |||||| | Sbjct 66662 ACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTT 66721 Query 115009 AGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGC 115066 ||| || || || || || || ||| | | | | || ||||||| Sbjct 66722 AGAGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTG 66779 Query 115067 ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATC 115126 | || || || || ||| ||| ||| ||||| | ||||| || ||||||| Sbjct 66780 AGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATG 66839 Query 115127 CCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGT 115186 |||||||||||||| |||| | | || |||||||| |||||||| || | ||| Sbjct 66840 CCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGT 66899 Query 115187 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 |||||||||||||||||||| || | || ||| |||| Sbjct 66900 GTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA 66937 >seq47 Length=84389 Score = 120 bits (132), Expect = 4e-22 Identities = 176/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| ||||||||||| ||| |||||| || || |||||| || || Sbjct 59202 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 59143 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||||||||| |||||||| | |||||| || | || || || ||||||||||| Sbjct 59142 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 59083 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAA 126225 ||||| || || || |||| || ||||| ||||||| | | | ||| || || | Sbjct 59082 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCTTCGTCGTTGAT 59024 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGG-ACGGTCTGGATCGCTTCAA 126284 ||| || ||||||| ||||||| || || ||||| | ||||| ||||| || | Sbjct 59023 CCAGCGCAGGGCCCACTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATCGCGTCGA 58965 Query 126285 AGAG 126288 |||| Sbjct 58964 AGAG 58961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350090547600