Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq16 100 3e-16 seq418 96.9 3e-15 seq111 91.5 1e-13 seq22 82.4 8e-11 >seq16 Length=163030 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||| || | |||| ||| || || || || ||||||||||| | Sbjct 128571 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 128630 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || | |||||||||||| | || || ||||||||||| || || Sbjct 128631 AAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 128690 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | ||||| Sbjct 128691 GATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCAC 128750 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||||||| | ||| || ||||| || ||||| Sbjct 128751 CTCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || || || |||||||||||||| || | | |||||| | ||| Sbjct 127903 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCT 127962 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | || | ||||||||||| || || || || || || || Sbjct 127963 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 128022 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | ||||| || | || | |||| Sbjct 128023 TGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 128082 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || |||||||| ||||| Sbjct 128083 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | || || |||| || |||||||||||| Sbjct 128830 GTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCGAGCTGCTTGCCG 128889 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||||||||| |||||||| || || || ||||| || ||| ||| Sbjct 128890 GCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGGATCTTTGTCTTG 128949 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || || || || | || | ||||||||| |||| ||| Sbjct 128950 ACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTC 129009 Query 64427 TTTACG 64432 || ||| Sbjct 129010 TTGACG 129015 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||| || | |||| ||| || || || || ||||||||||| | Sbjct 133921 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 133862 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || | |||||||||||| | || || ||||||||||| || || Sbjct 133861 AAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 133802 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | ||||| Sbjct 133801 GATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCAC 133742 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||||||| | || || ||||| || ||||| Sbjct 133741 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133694 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| | | |||||| |||| || || ||||||||| Sbjct 133434 GTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 133375 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||| ||||| ||||| || || || || ||||| || || ||| Sbjct 133374 GCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTG 133315 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || || || || || | || | ||||||||| |||| ||| Sbjct 133314 ACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTC 133255 Query 64427 TTTACG 64432 || ||| Sbjct 133254 TTAACG 133249 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||| || |||||||||||||||||||| Sbjct 133662 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCG 133603 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | || || ||||| ||||| || || || || || || || || ||| Sbjct 133602 GCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTG 133543 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || || ||||| | || | ||||||||||| | || Sbjct 133542 ACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 133483 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 133482 TTGACGAAGATCTGCAT 133466 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || || |||||||| |||||||| || | | |||||| | || Sbjct 134133 AGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 134074 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||||||||| || | || | ||||| || || |||||||| || || || ||| Sbjct 134073 TCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCT 134014 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || ||||| | || | ||| Sbjct 134013 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 133954 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || ||||| || ||||| Sbjct 133953 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || ||||||||||| | | |||||| | || || | |||| Sbjct 128140 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGC 128199 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| | || | || || ||||| |||||||| || || || ||||| || || Sbjct 128200 TTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTC 128259 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || | || ||||| | ||| | ||||||||||| Sbjct 128260 GTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACTTCGAGAGTGATAGTCTTGCCGGTG 128319 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || ||||| || ||||| Sbjct 128320 AGGGTCTTGACGAAGATCTGCAT 128342 >seq418 Length=175290 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | |||||| || || | ||||| || || || |||||||| || | Sbjct 54855 ACCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 54914 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||||||||| | ||||| ||||||||||| || || Sbjct 54915 AAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGG 54974 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || ||||| ||| || | || | | || | ||||| Sbjct 54975 GATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCAC 55034 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || |||| || || ||||| || ||||| Sbjct 55035 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 55082 >seq111 Length=618870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | || ||||||||||| |||||||| || | Sbjct 410843 ACCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGA 410784 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| |||||||||||||| | ||||| || || ||||| || || Sbjct 410783 TAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGG 410724 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || || ||| || || | || || || || || Sbjct 410723 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTAC 410664 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 410663 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 410616 >seq22 Length=350823 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 155354 GTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCAT 155413 ||||||||| |||||||| |||| ||| || ||||| || |||| || || ||||| Sbjct 66956 GTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCAT 67015 Query 155414 CAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGC 155456 ||||||||||| |||||| || || ||||||||||||| Sbjct 67016 GAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGC 67058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641864586800