Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq22 205 9e-48 seq418 122 9e-23 seq16 107 2e-18 seq136 104 2e-17 seq111 89.7 5e-13 >seq22 Length=350823 Score = 205 bits (226), Expect = 9e-48 Identities = 942/1470 (64%), Gaps = 66/1470 (4%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| ||||| |||||||| || | ||| |||| || | ||||| ||| ||| Sbjct 65598 GGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAG 65657 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | |||||| | ||||| ||| || || ||| || | ||||| ||||| || | Sbjct 65658 GCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCGGTGGGCATAGGGGCGA 65717 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 || | || || || | ||||| || ||||| | ||| | | | ||| |||| Sbjct 65718 GCAGGAGGGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATCTCGGCCCAGTCCC 65777 Query 153208 ACAG--CGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265 | || ||| | |||| | | ||| | |||||| || | | | || |||| || Sbjct 65778 AGAGTCCGCTGGGGGTGACTCC--CCAGAGGTCGTATTGCAGCTCGCCCTTGCTGGTCGG 65835 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGC-CTCG 153323 ||||| | | || |||| | ||| | | |||| | || ||||| | | | |||| Sbjct 65836 GCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGG-CGAGCTCGCA-CGATCGCTCG 65893 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTC 153383 || ||| | | ||| || || ||| ||| || | ||||| || || ||| Sbjct 65894 AGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGGCTG 65953 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| ||| | || | || || |||||||| ||||| | || |||| |||||| Sbjct 65954 TCGAACGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCCGATACCGATG 66013 Query 153444 GGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498 || || || | |||| || ||||||| | | || |||| ||| || Sbjct 66014 GGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACA-----GGGTAGTAGTTGACAT 66068 Query 153499 CGATAATTTTGTTGAGGTTGCGCACCACC-ACTTTAGTTATCGCCTTAAGTTTCTCGAAA 153557 |||| || ||||||||||||| ||| | | || || || | | | | || |||| ||| Sbjct 66069 CGATGATCTTGTTGAGGTTGC-CACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAG 66127 Query 153558 TCATAGGTCATT----TCGT--------CGACGCGTACGCATCGATTCACGGCAATAGAC 153605 || || ||| || |||| ||| | | ||| | | | || ||| Sbjct 66128 TCGTATGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAAGGTAGAGCCATACTG 66187 Query 153606 GCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGG 153665 || || || ||||| || ||| || | ||||||||| || |||||| | ||| ||| Sbjct 66188 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 66247 Query 153666 TTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTG 153725 ||| ||| || ||| ||| | || | || || ||||| ||| ||||| ||| Sbjct 66248 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 66307 Query 153726 AAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGA---CGATAAACCTATGCAGG 153782 | |||||| | || ||| ||||| || | |||| || ||| | || Sbjct 66308 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGC--- 66364 Query 153783 TCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGC 153842 | || || || | ||| || ||||| | |||||| |||||| || | Sbjct 66365 TTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 66424 Query 153843 TCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGAC 153902 || ||||||||||||||| || ||||| ||||| |||| | || |||||||||||| Sbjct 66425 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 66484 Query 153903 CACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATG 153962 ||| ||| | ||| || |||||||| || || | ||| || ||||| | | Sbjct 66485 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 66544 Query 153963 AGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATA 154021 || || || || | |||||| ||| ||| | || | || | || | | | Sbjct 66545 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGA-A 66603 Query 154022 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC----TTTCCGC 154077 || ||| | ||||||||| |||||||||| ||| | ||||||| |||| || || | Sbjct 66604 GACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTTGCCAC 66663 Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137 |||||||||||| ||| | | |||||||||||||| | ||| || | | ||| | | Sbjct 66664 CCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAG 66723 Query 154138 CGGTGCCGTTGGT--CG--AAT---TGATCTTGCTGCCGCGGGCGCGCACTTGATGCACG 154190 | ||||| || || ||| ||| | | | || ||| ||| | ||| | Sbjct 66724 AGACACCGTTAGTTCCGGCAATGTATGAGC-CGGTACCACGG--ATGCAGTGGAT----G 66776 Query 154191 TTAACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCT 154246 || | ||| ||||| || ||||| ||| |||| ||| |||||| || || Sbjct 66777 TTGAGGCCGATGCCACCAGCCGT-CTTGCTGATCATG---GCGCAGGTCTTGAGAGTGTC 66832 Query 154247 GTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGG 154306 ||||||||||||||| ||||| | | || || ||| ||||| ||||||| || Sbjct 66833 GTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGG 66892 Query 154307 AATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCAT 154366 || | || || || ||||||||||| || || || || || | ||| Sbjct 66893 GTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACAT 66952 Query 154367 CATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCG 154426 | | ||| || |||||||| || ||||| | ||||| ||||||| || || || Sbjct 66953 GAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCG 67012 Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||| || || || |||||||| Sbjct 67013 CATGAGCATGTGTTGGGGGCGCTCGGCGAC 67042 >seq418 Length=175290 Score = 122 bits (134), Expect = 9e-23 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | |||||| ||||||||| || || |||| Sbjct 54889 GACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCG 54948 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || |||||||| ||||| || |||| || || | Sbjct 54949 AAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTC-CTGGATTTTGGTCTTGAC 55007 Query 138541 TG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || ||||| ||||||||||||| || | || ||||| ||||| || || Sbjct 55008 GGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTT 55067 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 55068 GACGAAGATCTGCATG 55083 >seq16 Length=163030 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| ||| | || || |||||||||||| || |||| Sbjct 133431 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCG 133372 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||||||||||||||| || || || ||||| ||| || || | | Sbjct 133371 AAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACA 133312 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | ||||| ||||||| || | || || ||||||||||| || Sbjct 133311 TTGT-CGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTT 133253 Query 138600 TAC 138602 || Sbjct 133252 AAC 133250 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||||||| || || |||| | Sbjct 128833 GACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCA 128892 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || ||||| ||||||||||| || || || || || || | ||||| || | Sbjct 128893 AAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATC-TTGGATCTTTGTCTTGAC 128951 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | ||||| ||||||| || | || || ||||||||||| | Sbjct 128952 GTTG-TCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCT 129010 Query 138599 TTAC 138602 | || Sbjct 129011 TGAC 129014 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | ||| || || | ||||||||||||||||||||||||| | Sbjct 128344 CCACCACGCAGGCGGAGAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGAC 128403 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || |||| |||| | ||||| || |||||||| Sbjct 128404 AATGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGG 128463 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || || || | ||| || | ||||| | ||||| | Sbjct 128464 ATGCCCTCCTTGTC-CTGAATCTTGGTCTTGACGTTG-TCGATAGTGTCTGAGGACTCGA 128521 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | || || || || || || || || || |||||||| Sbjct 128522 CTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| || | ||| ||||| | | |||||||| || ||||||||||| Sbjct 133693 GCCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGA 133634 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||| || || || || |||| |||| | || |||||||||||||| Sbjct 133633 GAGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 133574 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || || || | ||| || | ||||||| ||||| Sbjct 133573 GATGCCCTCCTTGTC-CTGAATCTTGGTCTTGACGTTG-TCGATAGTGTCGGAGGACTCA 133516 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || |||| || | || || || || || || || || || ||||||||| Sbjct 133515 ACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 133465 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || ||||| | | ||||||||||||||||||||||| Sbjct 127887 GCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA 127946 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || ||||| || || || | |||| | ||||| |||||||| || Sbjct 127947 AAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGG 128006 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || || || |||| || | |||||| | || ||| Sbjct 128007 GATGCCCTCCTTGTC-CTGAATCTTCGTCTTGACATTG-TCGATGGTGTCTGATGATTCC 128064 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | || || || || || || || || ||||||||||| Sbjct 128065 ACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 >seq136 Length=51868 Score = 104 bits (114), Expect = 2e-17 Identities = 135/183 (74%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||| || ||||||||| || || |||| Sbjct 49573 GACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCG 49514 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||||||||||||||| || |||||||| ||||| || | || || || | Sbjct 49513 AAGATGAGACGCTGTTGGTCCGG-GGAATACCTTCCTTGTC-CTGGATCTTGGTCTTGAC 49456 Query 138541 TG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || ||||| |||||| ||||||| || | ||| || || || || || || Sbjct 49455 GGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTT 49396 Query 138600 TAC 138602 || Sbjct 49395 GAC 49393 >seq111 Length=618870 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | || | | | || || ||||| |||||||||||| Sbjct 410842 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 410783 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| ||||| || || |||| |||| ||||| |||||||| || || Sbjct 410782 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 410723 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| || | || || || | ||| || | ||||||| ||||| | Sbjct 410722 ATGCCCTCCTTGTC-TTGGATCTTGGTCTTGACGTTG-TCAATCGTGTCGGAGGACTCTA 410665 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || | || || ||||| || || || || || ||||||||| Sbjct 410664 CCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATG 410615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259484458400