Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq16 131 2e-25 seq111 82.4 7e-11 >seq16 Length=163030 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | || ||||| || || || ||||||||| Sbjct 128116 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 128175 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||||||||| || || || ||||| Sbjct 128176 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 128235 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| ||| ||||| | || | |||||| | ||||||||| Sbjct 128236 ATGCCCTCCTTGTCTTGGATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACT 128295 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || || || |||||||| Sbjct 128296 TCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128342 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| |||||||| ||||| || | Sbjct 128344 CCACCACGCAGGCGGAGAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGAC 128403 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || ||| ||||||||||||||||||| ||||| Sbjct 128404 AATGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGG 128463 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || || ||||| |||| |||| ||||| | |||||| Sbjct 128464 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTG-TCGATAGTGTCTGAGGACTCGAC 128522 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | || |||||||| || || || || || |||||||| Sbjct 128523 TTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || ||||| |||||||| ||||| || Sbjct 127888 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 127947 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| |||||||||||||||| || || || Sbjct 127948 AGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGG 128007 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || ||| ||||| | |||| |||||| | || || Sbjct 128008 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 128067 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || || ||||||||||| Sbjct 128068 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||||||| | || ||||||||||| || ||||| || Sbjct 134148 CCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAA 134089 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| ||||||||||||| ||||| ||||| Sbjct 134088 AGGGTGCGGCCATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGA 134029 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| || || ||||| ||||| ||| ||||| | |||||| Sbjct 134028 ATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGT-CGATAGTGTCTGAGGACTCGAC 133970 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | || |||||||| || || || || || |||||||| Sbjct 133969 TTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || ||||| || || || ||||| || Sbjct 133692 CCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAG 133633 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || ||| |||||||||| || || || ||||| Sbjct 133632 AGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGG 133573 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || || ||||| |||| |||| ||||| | ||| || Sbjct 133572 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTG-TCGATAGTGTCGGAGGACTCAAC 133514 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||| || | || |||||||| || || || || || ||||||||| Sbjct 133513 TTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 133465 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | ||| ||||| || || || |||||||| Sbjct 128572 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 128631 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||| | |||||||| || || || Sbjct 128632 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 128691 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| ||| | |||| |||| |||||| | || || Sbjct 128692 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTG-TCGATGGTGTCTGATGATTCCAC 128750 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||| ||||| || || || |||||||| Sbjct 128751 CTCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | ||| ||||| || || || |||||||| Sbjct 133920 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 133861 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||| | |||||||| || || || Sbjct 133860 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 133801 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| ||| | |||| |||| |||||| | || || Sbjct 133800 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTG-TCGATGGTGTCTGATGATTCCAC 133742 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || |||||||| || || || || || ||||||||| Sbjct 133741 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 133693 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||||||| Sbjct 133464 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAA 133405 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || || || || || ||| |||| | ||||| || || ||||| Sbjct 133404 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 133345 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| || ||||| | |||| |||||||| ||| || Sbjct 133344 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACC 133285 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| | || ||||| |||||||| || || Sbjct 133284 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 133250 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| || | Sbjct 128800 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAC 128859 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || || |||| | |||||||| || ||||| Sbjct 128860 AATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGA 128919 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||| || ||| || ||||| |||| || | |||||||| ||| || Sbjct 128920 ATGCCCTCCTTATCTTGGATCTTTGTCTTGACGTTG-TCAATGGTGTCCGAGGACTCAAC 128978 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| | || ||||| |||||||| || || Sbjct 128979 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 129014 >seq111 Length=618870 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || |||||||| || ||||| ||| | ||| || || || ||||| || || Sbjct 410812 GTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCG 410753 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || || || || || || |||||||||||||| ||| || |||| Sbjct 410752 GCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTG 410693 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||| | ||| || |||| ||| | || ||||| || || || Sbjct 410692 ACGTTG-TCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCAGTAAGGGT 410634 Query 127096 TTTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 410633 CTTGACGAAGATCTGCATG 410615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498006432800