Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq22 168 8e-37 seq47 127 3e-24 >seq22 Length=350823 Score = 168 bits (186), Expect = 8e-37 Identities = 497/758 (66%), Gaps = 20/758 (3%) Strand=Plus/Plus Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 || || || || |||| | ||||||| | | ||||||| || || ||||| |||| Sbjct 66188 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 66247 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || | ||| |||||||| | ||||||||| || ||||| ||| || |||||| Sbjct 66248 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 66307 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || ||||| | || | || |||||||| || | || ||||| || | ||| | | | Sbjct 66308 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 66367 Query 116619 GGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | || | || || |||| || || ||||| ||||||||| |||||| ||| Sbjct 66368 TGGGCCTTG-ACGGTTCGGCGA--GCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 66424 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGAC 116736 || ||||| || || | || | ||| || || || | | || || | || ||| Sbjct 66425 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 66484 Query 116737 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 116796 || | || || || || ||||||||||| | ||| |||||||| || || ||||| Sbjct 66485 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 66544 Query 116797 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856 || || || || | || || | || || || | | || | || || | | Sbjct 66545 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 66604 Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG-------ACC 116909 | || | |||||| || || | ||| | |||| | | ||| |||| || Sbjct 66605 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTTGCC 66661 Query 116910 AGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATC 116969 | |||| | || || | || || ||| || ||||||||||| || | |||||| | Sbjct 66662 ACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTT 66721 Query 116970 AGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGC 117027 ||| || || || || || || ||| | | | | | || |||||||| Sbjct 66722 AGAGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTG 66779 Query 117028 ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATC 117087 | || || || || ||| ||| ||| ||||| | ||||| || ||||||| Sbjct 66780 AGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATG 66839 Query 117088 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGT 117147 || ||||||||||| |||| | | || |||||||| |||||||| || | ||| Sbjct 66840 CCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGT 66899 Query 117148 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||||||||||||||||||| || | || ||| |||| Sbjct 66900 GTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA 66937 >seq47 Length=84389 Score = 127 bits (140), Expect = 3e-24 Identities = 176/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 59203 AGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACC 59144 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 59143 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGAT 59084 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAA 127697 ||||| || || || |||| || ||||||||||||| | | | ||| || | | Sbjct 59083 ACCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCTTCGTCGTTGA 59025 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || ||||||| ||||||| || || || | ||||| ||||| || | Sbjct 59024 TCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGA 58965 Query 127758 AGAG 127761 |||| Sbjct 58964 AGAG 58961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503595645200