Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq16 143 6e-29 seq418 138 3e-27 seq136 132 1e-25 seq111 102 2e-16 >seq16 Length=163030 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| |||||| |||| | ||| | ||||| Sbjct 128587 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 128646 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| || |||||||||||||| || || || ||| Sbjct 128647 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 128706 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||||| || ||| || || | ||||| ||| Sbjct 128707 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 128766 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| ||||| || || || Sbjct 128767 TTGCCGGTGAGAGTCTTCACGAAGATCTG 128795 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| |||||| |||| | ||| | ||||| Sbjct 133905 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 133846 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| || |||||||||||||| || || || ||| Sbjct 133845 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 133786 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||||| || ||| || || | ||||| ||| Sbjct 133785 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 133726 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 133725 TTGCCGGTGAGGGTCTTGACGAAGATCTG 133697 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || ||||| ||||||||||| | ||||||||| | | || | |||||| Sbjct 127903 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCT 127962 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | |||||||||||||| || || || ||| Sbjct 127963 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 128022 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| |||||||| || ||| || || | ||||| ||| Sbjct 128023 TGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 128082 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || ||||| || Sbjct 128083 TTGCCGGTGAGGGTCTTGACGAAAATCTG 128111 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| ||||||||||| | ||||||||| | ||| || | || || Sbjct 128359 AGAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCC 128418 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| | |||||||| |||||| || || || ||| Sbjct 128419 TCCAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCC 128478 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||||| | || || || | ||||| ||| Sbjct 128479 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 128538 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 128539 TTGCCGGTGAGGGTCTTGACGAAGATCTG 128567 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | || |||||||| |||| ||||||||| | ||| || | || || Sbjct 128815 AGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCC 128874 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| |||||||| ||||||||||||||| ||| || || || Sbjct 128875 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCT 128934 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 128935 TGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 128994 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || ||||| || || Sbjct 128995 TTGCCAGTCAGAGTCTTGAC 129014 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || || || ||||| ||||||| ||||||||||| | || | ||||| Sbjct 134133 AGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 134074 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || |||||||| | ||||| || |||||| ||| || || || Sbjct 134073 TCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCT 134014 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||||| | || || || | ||||| ||| Sbjct 134013 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 133954 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 133953 TTGCCGGTGAGGGTCTTGACGAAGATCTG 133925 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| |||||||| |||| |||||| || | | || | ||||| Sbjct 128131 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 128190 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| | || || ||||||||| ||| || || || Sbjct 128191 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCT 128250 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 128251 TGGATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACTTCGAGAGTGATAGTC 128310 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 128311 TTGCCGGTGAGGGTCTTGACGAAGATCTG 128339 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || |||||||| |||| ||||||||| | | || | ||| ||||| |||||||| ||| Sbjct 133662 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCG 133603 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | || || ||||||||| || || || ||||||||||| ||| Sbjct 133602 GCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTG 133543 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| ||||| | | || || || | ||||| ||||| || ||||| || Sbjct 133542 ACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 133483 Query 199613 TTCACAAAAATTTG 199626 || || || || || Sbjct 133482 TTGACGAAGATCTG 133469 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || |||||||| |||| |||||| || | | || | || || Sbjct 133449 AGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 133390 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| |||||||||||||||||||| ||||||||| || || || || Sbjct 133389 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 133330 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 133329 TGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 133270 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || ||||| || || Sbjct 133269 TTGCCAGTCAGAGTCTTAAC 133250 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||||||||| ||||||||||| ||||| | ||| | | ||||||||| ||||| Sbjct 128672 CTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAG 128613 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 || ||||| || |||||| | ||| Sbjct 128612 AAGGAGTCAACGCTTCACTTGGTT 128589 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||||||||| ||||||||||| ||||| | ||| | | ||||||||| ||||| Sbjct 133820 CTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAG 133879 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 || ||||| || |||||| | ||| Sbjct 133880 AAGGAGTCAACGCTTCACTTGGTT 133903 >seq418 Length=175290 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||||||||||||||| |||| ||||||||| | | ||| | || || Sbjct 54871 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 54930 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| |||||||||||||| || ||||| ||| Sbjct 54931 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 54990 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| |||| |||| || ||| | | || || || | ||||| ||| Sbjct 54991 TGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 55050 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || || || || Sbjct 55051 TTACCCGTCAGGGTCTTGACGAAGATCTG 55079 >seq136 Length=51868 Score = 132 bits (146), Expect = 1e-25 Identities = 150/200 (75%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| |||||||| |||| ||||||||| | | ||| | || || Sbjct 49591 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 49532 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct 49531 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGG-GGAATACCTTCCTTGTCC 49473 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| |||| |||| || ||| | | || || || | ||||||||| Sbjct 49472 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 49413 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || ||||| || || || Sbjct 49412 TTGCCGGTGAGGGTCTTGAC 49393 >seq111 Length=618870 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || || || ||||||| ||||||||| | | || | || ||| Sbjct 410827 AGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCT 410768 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||| || ||||| || || || || || Sbjct 410767 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCT 410708 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | ||||| | | ||||| || | ||||| ||| Sbjct 410707 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTC 410648 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 410647 TTGCCAGTAAGGGTCTTGACGAAGATCTG 410619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178914500681490