Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq16 134 2e-26 seq111 132 5e-26 seq418 129 7e-25 seq136 116 4e-21 >seq16 Length=163030 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || || ||||| | || |||||||||||||| ||||| Sbjct 127923 CTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAA 127982 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || |||||||||| |||||| |||||| | Sbjct 127983 GATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATT 128042 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| |||||||| || | |||||||| ||||| || || || || || Sbjct 128043 GTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGAC 128102 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 128103 GAAAATCTGCAT 128114 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||||||| |||||| ||||| |||||||| || || || || |||| || Sbjct 133674 ACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCA 133615 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| ||||| || || ||||| | || | || |||||||||| Sbjct 133614 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 133555 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||||| ||| | | | |||||| || || || || | ||||| || || Sbjct 133554 ATCTTGGTCTTGA-CGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTT 133496 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || ||||| ||||| Sbjct 133495 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 133466 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || || | ||||||||||||||| Sbjct 128607 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 128666 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||||||| ||||||| |||| | ||| Sbjct 128667 GATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGTCTTCA-CGT 128725 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| |||||||| || | |||||||| ||||| || || || || | Sbjct 128726 TGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCA 128785 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 128786 CGAAGATCTGCAT 128798 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || || | ||||||||||||||| Sbjct 133885 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 133826 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||||||| ||||||| |||| | ||| Sbjct 133825 GATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGTCTTCA-CGT 133767 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| |||||||| || | |||||||| ||||| || || || || | Sbjct 133766 TGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGA 133707 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 133706 CGAAGATCTGCAT 133694 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || | || || |||| || ||||||||||||||||| Sbjct 128379 CTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 128438 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| |||||||| || | || | || |||||||||| ||||| |||||| ||| Sbjct 128439 GATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTGA-CGT 128497 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | ||||| || ||||| || || || || | Sbjct 128498 TGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGA 128557 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 128558 CGAAGATCTGCAT 128570 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||||| |||||| ||||| |||||||| || | || || |||| ||| Sbjct 128818 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCG 128877 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||||| || || | |||||||||||| | || | || |||||| || | Sbjct 128878 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 128937 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||||| ||| | | | ||||| || || || || | |||||||| || Sbjct 128938 ATCTTTGTCTTGA-CGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTT 128996 Query 46564 GCCCGTCAGCGTTTTAAC 46581 ||| ||||| || || || Sbjct 128997 GCCAGTCAGAGTCTTGAC 129014 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||| |||||| ||||| ||||| ||||| || ||||| |||| ||| Sbjct 133446 ACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 133387 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||||||||| || | ||||| ||||| | || | || ||||||||| | Sbjct 133386 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 133327 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || || || | |||||||| ||| Sbjct 133326 ATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 133267 Query 46565 CCCGTCAGCGTTTTAAC 46581 || ||||| || ||||| Sbjct 133266 CCAGTCAGAGTCTTAAC 133250 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| | || || | ||||||||||||||| Sbjct 128151 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 128210 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || || ||||| | || | || ||||||||| ||||||| |||||| | Sbjct 128211 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTCGTCTTGACGTT 128270 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | ||||| || ||||| || || || || Sbjct 128271 ATCAATGGTGTCGGAGCTC---TCGACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTT 128327 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 128328 GACGAAGATCTGCAT 128342 >seq111 Length=618870 Score = 132 bits (146), Expect = 5e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| |||||||||||||| || || |||| |||||||||||||||||||| Sbjct 410806 TCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 410747 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | || ||||||||| |||||| |||||| ||| Sbjct 410746 ATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTT 410688 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||| || || || || | |||||||| ||||| || || || || || Sbjct 410687 GTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 410628 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 410627 GAAGATCTGCAT 410616 >seq418 Length=175290 Score = 129 bits (142), Expect = 7e-25 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| |||||||||||||||||||| Sbjct 54891 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 54950 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||||||||| | || | | ||||||||| ||| || |||||| || Sbjct 54951 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 55010 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| || ||||| || | ||||| || || |||||||| || || Sbjct 55011 GTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTG 55068 Query 46580 ACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 55069 ACGAAGATCTGCAT 55082 >seq136 Length=51868 Score = 116 bits (128), Expect = 4e-21 Identities = 137/182 (75%), Gaps = 5/182 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| |||| |||||||||||||||||||| Sbjct 49571 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 49512 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||| ||||| | || | | ||||||||| |||||| |||||| || Sbjct 49511 GATGAGACGCTGTTGGTCCG-GGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACGGC 49453 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| ||| || || || | ||||| || ||||| || || || || Sbjct 49452 GTCG--ATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTG 49395 Query 46580 AC 46581 || Sbjct 49394 AC 49393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235079224400