Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq117 343 2e-89 seq136 205 1e-47 seq103 113 6e-20 >seq117 Length=59242 Score = 343 bits (380), Expect = 2e-89 Identities = 740/1101 (67%), Gaps = 8/1101 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| ||||| ||||| |||||||| || | || || Sbjct 57481 ATGGCGGCCTGGACAGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGGACTTGTTG 57540 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || |||||| || | || | | | || | || || || || || Sbjct 57541 GGCTCGCGACCGTTGAAGAAGTCGCGGAGGAGCTTCTGGACACGGGGAATACGCGTGGAA 57600 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 |||||||| | ||||| || || || | || || ||||| ||||| || || Sbjct 57601 CCACCGACAAGGACGATCTCGTTGACGGAGGCCTTGTCTATCTTCGAGTCGCGGAGGACC 57660 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || ||||| || || || | ||| | ||| |||||| ||||| ||||| ||| Sbjct 57661 TTCTCGACGGGCTCGATGGTGTGGGAGAAGAGGTCACCACACAGCTCCTCGAAACGGGCA 57720 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || ||||| || ||||| || | || || | | || || || || ||||| || Sbjct 57721 CGAGTGATGGAGGTGTAGAAGTCGATACCCTCAAAGAGGGAGTCGATCTCGATGGTGGTC 57780 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | ||||| | || |||||||| ||||| || || || | |||||||| | Sbjct 57781 TGGGCGGCGGAAGAAAGAGTGCGCTTTGCTCGCTCGGCGGCGGTGCGGAGACGACGAACG 57840 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441 ||||| | | || || || ||||| | || || || ||||| | |||||| Sbjct 57841 GCACGGGCAGAAGAGGTGATGTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACGAAGTGG 57900 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 | ||| | ||||| || || ||||||||||| || || || ||||| || ||| Sbjct 57901 GTTACGAGACGGTTGTCGAAGTCCTCGCCACCCAAGTGGGTGTCACCGGCGGTGGCCTTG 57960 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || || || || | || ||| | | | ||| ||||| ||||| || || |||| | Sbjct 57961 ACCTCGAATATGCCCTCCTCGATGGTGAGGAGCGAGACATCGAACGTGCCTCCTCCCAAG 58020 Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621 || || ||||| |||||| | ||| | || ||||| ||||||||||| || || || Sbjct 58021 TCGAAGATGAGAACGTTCTTCTCGCCCTCGCCCTTCTTGTCGAGACCGTAAGCAATGGCA 58080 Query 7622 GCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATC 7680 || || || || || || || || || | ||| ||| || || ||||| || | || || Sbjct 58081 GCGGCAGTGGGCTCGTTGATGATTCGCATGAC-GTTGAGACCGGCAATGGTACCGGCGTC 58139 Query 7681 TTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGT 7740 || || || |||||||| || ||||| |||||||| || || || ||||| |||||| | Sbjct 58140 CTTGGTAGCCTGTCGTTGAGAGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTCCTT 58199 Query 7741 GACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 ||| |||||| || | || || | || ||| ||| |||||||| | || Sbjct 58200 GACGGAGCCACCGAGGTAGGCCTCGGCAGTCTCGCGCATCTTGAGCAGAACCATGGCGGA 58259 Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 | ||| |||| | || || || || || || | || || | || || || || Sbjct 58260 GACCTCCTCAGGGGTGAAAGTCTTGGTCTCGCCTTTGTACTCGACCTGGATTATTGGCTT 58319 Query 7861 ATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG 7920 | | | | ||| ||||| | | ||| | ||||| ||| || |||| Sbjct 58320 ---GGTACCTTGGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGGACTGTACCTCGGA 58376 Query 7921 GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCAT 7980 ||| | ||||| | ||||| || ||||| || || || |||||||| | ||||||||| Sbjct 58377 GTCAGCGAACTTGCGGCCGATGAGTCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCAT 58436 Query 7981 GGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGAC 8040 ||| || |||||||| || || || ||||| || || || | | || || || ||||| Sbjct 58437 GGCGGTCTGGTTCTTGGCGGCATCACCGATGAGGCGCTC-TGA--GTCGGTGAAGGCGAC 58493 Query 8041 GTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTG 8100 ||| || ||||| || || || || ||||| || || || | || || |||||||| || Sbjct 58494 GTATGAGGGGGTTGTGCGGTTACCCTGGTCATTGGCGATGACCTCAACCCGGTCGTTCTG 58553 Query 8101 CCAGACGCCGACGCACGAATA 8121 ||| ||| |||| || || || Sbjct 58554 CCATACGGCGACACAGGAGTA 58574 >seq136 Length=51868 Score = 205 bits (226), Expect = 1e-47 Identities = 452/667 (68%), Gaps = 12/667 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || |||||||||| | || || || || || ||||| || || || ||| Sbjct 23674 TCGAAGTCCTCGGCACCCAAGTGGATGTCACCGGCAGTGGCCTTGACCTCGAATATGCCT 23733 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | || ||| ||||| ||| | || || |||| |||||| |||| ||| Sbjct 23734 TCCTCGATGGTGAGCAGCGAGACATCGAACTTGCCTCCTCCCACGTCAAAGATGACAACG 23793 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | || ||||| ||||||| ||| || || | || || || || || Sbjct 23794 TTCTTCTCGCCCTCGCCCTTCTTGTCGAGACTGTAAGCAATGGTAGCAGCGGTGGGCTCG 23853 Query 7637 TTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | ||| ||| | || ||||| || || || || || || || | ||| Sbjct 23854 TTGATGATGCGCATGAC-GTTATGACCGGCAATGGTAGCAGCGTCCTTGGTGGCCTATCG 23912 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || ||| | |||||||| || || || ||||| ||| || |||| |||||| Sbjct 23913 TTGGGAGTCGCTGAAGTAGGCGGGAACAGTGACGACGGCGGCCTTGACGGAGCCACCGAG 23972 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | || | | || ||| ||| || ||||| | || | ||| |||| | Sbjct 23973 GTAGGCCTCGGGAGTCTCGCGCATGTTGAGCAGGACCATGGCGGAGACCTCCTCAGGGGT 24032 Query 7816 AAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 || ||| || || || | || | || || | || || || | | | | Sbjct 24033 GAA-TGTCTTGGTCTCGACCTTGTACTCGACCCAGAGTATTGGCTTG---GTACCTTGGT 24088 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 || ||||| | | ||| | ||||| ||| || |||| ||| | ||||| | Sbjct 24089 CGAGGACCTTG-AGGGCCAGTGCTTCATGTCGGACTGTACCTCGCTGTCAGCGAACTTGC 24147 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 |||||||| ||||| || || || |||||||| | |||||||||||| || ||||||| Sbjct 24148 GGCCGATAAGTCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCATGGCGGTCTGGTTCT 24207 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || ||||| ||||| || || || | | || || || |||||||| || ||||| | Sbjct 24208 TGGCGGCGTCACCGATGAGGCGCTC-TGA--GTCGGTGAAGGCGACGTATGAAGGGGTAG 24264 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || | || |||||||| || || | || || ||||| |||||||| ||| | || | Sbjct 24265 TGCGGTCGCCCTGGTCGTTGGCGATGACCTCAACTCGGTC-TTTTGCCATACGGCAACAC 24323 Query 8115 ACGAATA 8121 | || || Sbjct 24324 AAGAGTA 24330 >seq103 Length=63227 Score = 113 bits (124), Expect = 6e-20 Identities = 279/413 (68%), Gaps = 18/413 (4%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||||| | | ||| || | |||| | | | || || Sbjct 21155 TCCTCGAAACGGGCACGGGTGATGGAGGCCTGGAAGTCGATACCGTTGGAGAGGGAGTCG 21096 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | || || || || | | || | ||||||||||||||||| ||||| | Sbjct 21095 ACCTCGACAGTGGTCTGGGTGACACTG--GACAGTGTTCGCTTTGCGCGCTCGCACGCAG 21038 Query 7365 TTCGTAAACGACGAAGGGCACGCGG--GTTACCGGAAATATCTTTCTTATGTTTACGTTT 7422 || | |||||| | |||||| || || |||| || || ||| | || || | Sbjct 21037 ACCGCAGACGACGGATGGCACGGGGTCGTCACCG---ATCTCGACCTTGTTCTTGCGCTC 20981 Query 7423 AAACTCTTCAGAGAAGT-GTCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 ||||| | ||||| ||||| | | | | | ||||| || |||||||| | || Sbjct 20980 GAACTCCTTCTTGAAGTGGTCGAGAAGGGCATTG--TCGAAGTCCTCACCACCGAGATGG 20923 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || ||||| || ||||| | || | ||| || ||||| | | || ||| Sbjct 20922 GTGTCACCAGCGGTTGCCTTGACGGCGAAAACACCACCAGTGATGTTGAGAAGGGAGACA 20863 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTCT 7598 || ||||| || || || ||||| |||||||| |||||| | ||| ||| || || Sbjct 20862 TCGAACGTGCCTCCTCCGAGGTCGAAAATGAGAACGTTCTTCTCG--GTCGATGACTTGG 20805 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||||||||| || || || || || || || || || || ||||| ||| Sbjct 20804 AGTCGAGACCGTAAGCAAT-GCGGCGGCGGTGGGCTCGTTGATGATACGGAGA 20753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129068594800