Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq22 185 1e-41 seq47 127 3e-24 >seq22 Length=350823 Score = 185 bits (204), Expect = 1e-41 Identities = 477/718 (66%), Gaps = 18/718 (3%) Strand=Plus/Minus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||| || | || ||||||||||||||||||||||| | || |||||||| Sbjct 66937 TTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCG 66878 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||||| | | | ||||| || || ||| | ||||| |||| |||||||| Sbjct 66877 TGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACC 66818 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 || ||| ||| ||| ||||||||| ||||| | ||||||| || | | Sbjct 66817 TGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGT 66758 Query 111885 AACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | | | ||| || || || || || ||| || | ||||| | || ||||||| Sbjct 66757 ACC--GGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTC 66700 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG-------GCGTCGCAAGGGA 111995 |||| || ||| ||| || ||||| || | || | ||| ||||| || || Sbjct 66699 GCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAAACAAGCGTC-CA--GGT 66643 Query 111996 TCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGT 112055 | |||| |||| ||||||| |||||| | || || | |||||||| || | | Sbjct 66642 GCCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGG 66583 Query 112056 CTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCA 112115 ||||| || | ||||||| || ||| || ||||||| ||| || ||||| || Sbjct 66582 AAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCT 66523 Query 112116 GATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG 112175 || | ||||||||| |||| || ||| || | ||||| || | || || | || Sbjct 66522 GACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAG 66463 Query 112176 GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG 112235 ||||||||| | |||| | || || ||||| || || |||||| ||||||||| Sbjct 66462 TGCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAG 66403 Query 112236 GAAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCA 112293 || |||| || | || || || | || | | | | ||| | || ||||| Sbjct 66402 CGTGAGGGTCGTGC-TCGCCGAACCGT-CAAGGCCCAAAAGCTTTGGTACGCCGTTCTCG 66345 Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 || |||| || |||||||| | || | ||||||||||| ||||| |||| ||| Sbjct 66344 AGGCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGT 66285 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 || |||||||| | || |||||| | |||||||| || || || ||| |||| Sbjct 66284 CGAACCAAAAGAACCTCGGCACCATCAAGTGCTCCAACCTGTGCACGGAGATCATGGA 66227 >seq47 Length=84389 Score = 127 bits (140), Expect = 3e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| ||||| || | || ||||| || ||||||||||||||||| || || | Sbjct 59043 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 59102 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 59103 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 59162 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||| || |||||||| || ||| || ||||| Sbjct 59163 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 59202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738753138400