Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq22 165 1e-35 >seq22 Length=350823 Score = 165 bits (182), Expect = 1e-35 Identities = 559/865 (65%), Gaps = 18/865 (2%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| ||| ||||| ||||| |||| ||| || || |||| |||| Sbjct 66173 GGTAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATG 66232 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || ||||| |||| |||||| | ||| ||| || | |||||| || ||||| ||| | Sbjct 66233 ATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGG 66292 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||| || ||||| || |||||| | ||| | ||||| |||||||| | || ||||| | Sbjct 66293 TTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACG 66352 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520 || | ||| | | ||| ||| ||| | ||| |||| || ||||||||| Sbjct 66353 GCGTACCAAAGCTTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTC 66412 Query 110521 GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGA 110580 ||| | |||| || || | ||||| ||||||| ||||| || |||| Sbjct 66413 TCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGG 66472 Query 110581 CAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640 || | || ||||| | ||| || || || | ||||||||||| |||||| ||||| Sbjct 66473 CACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 66532 Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700 | || |||| || |||||| || |||| || | || ||||| | || || Sbjct 66533 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 66592 Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTAC-- 110758 | || || | || || |||||||| || || | |||| |||| || || || Sbjct 66593 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 66652 Query 110759 --GACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816 | || |||| | || ||||| || ||| |||||||| | |||||||| | Sbjct 66653 TTGTTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCAC 66712 Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTG 110876 || || | || ||| || || || ||| || | |||| ||| ||| Sbjct 66713 GATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTG 66772 Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTAC 110935 ||| | | || || ||||| ||| ||| || || || || ||| |||| || Sbjct 66773 GATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCT-TGAGAGTGT 66831 Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995 | || || || || ||||| || |||| ||| | || ||||| || ||||| |||| Sbjct 66832 CGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAG 66891 Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGAC 111054 | || || || || |||||||| || || | ||||| |||| || | | ||| Sbjct 66892 GGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGAC 66950 Query 111055 ATCTTGTTGTATGTGTCGAGTGC-----GGAGGGTACATCTTTACCGTGAATACCAATGG 111109 || |||||| ||||||| || || || || | ||||| || || | | Sbjct 66951 ATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAAC-----TCCCGTGGATGCCGACAG 67005 Query 111110 CAACTCGCATGAACATATATTGAGG 111134 |||||||||||| ||| | ||| || Sbjct 67006 CAACTCGCATGAGCATGTGTTGGGG 67030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972539766000