Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq22 329 6e-85 seq47 167 4e-36 >seq22 Length=350823 Score = 329 bits (364), Expect = 6e-85 Identities = 759/1123 (68%), Gaps = 28/1123 (2%) Strand=Plus/Plus Query 221359 CGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGT 221418 ||| || || ||||| | |||||||| ||| | | ||| | |||| || || Sbjct 65833 CGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGATCGCTC 65892 Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478 || || ||||||||||| ||||| |||||| ||||||| ||||||||||||| | Sbjct 65893 GAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGG-GC 65951 Query 221479 AGTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || | || || | || ||| |||||| ||||||| || || | |||||||||||| Sbjct 65952 TGTCGAACGCGTAACCCATGATCATGAAAG-CGTCGGCGAGACCGTTGACTCCGATACCG 66010 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||| | ||| | | ||||||| ||| || || || || || ||||||| ||| Sbjct 66011 ATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGGGTAGTAGTTGACATCG 66070 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 || | ||||||||||| | | ||| || |||||| ||||||| | | | Sbjct 66071 ATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAGTCG 66130 Query 221657 AACACCAACTCGCCGCCGTCGTG-GAGGGGTTCC--ACAAAAGCGTTTAGGGCAACGCTG 221713 | | || | ||| ||| ||| | | || ||| ||| || | ||| Sbjct 66131 TATGTC--CTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGTAGAGCCATACTG 66187 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || || || ||||| ||| | | |||| |||||||| || || ||| Sbjct 66188 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 66247 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| |||||||||||| || |||| || || || |||||||| ||||||||||||||| Sbjct 66248 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 66307 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || ||||| || || |||||||||| ||||||| | |||| || ||| || | | Sbjct 66308 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 66367 Query 221894 CTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATG 221953 ||| | || || | | |||||| || | | | | ||| ||||| Sbjct 66368 TGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTC-GTAGAGAGC--C 66424 Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013 || |||| || ||||| | || | || || || ||| ||||| |||||||| | Sbjct 66425 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 66484 Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073 || | ||| | || ||| | || |||||| | ||| |||||||| || || | ||| Sbjct 66485 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 66544 Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133 || || | || || ||||||| ||||| ||| ||||| || || | ||||| || Sbjct 66545 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 66604 Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG-TTGCCACC 222192 | ||||| |||||| ||||| | |||| ||| | || || || |||||| |||||||| Sbjct 66605 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTTGCCACC 66664 Query 222193 CTGATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 |||||| | | | | || | |||||||| |||||| | || || | |||| Sbjct 66665 CTGATCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGT 66720 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT-TACTGGCAG-A 222306 | || |||||| || || |||||| | ||| | || | | | | ||| | Sbjct 66721 TAGAGACACCGTTAGTTCCGGCAATGTATGAGCCG--GTACCACGGATGCAGTGGATGTT 66778 Query 222307 CATGCCGATACCACC-GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGA 222365 | |||||| ||||| | ||| || | ||||||||||||| ||||||||||||| || Sbjct 66779 GAGGCCGATGCCACCAGCCGTCTTGC-TGATCATGGCGCAGGTCTTGAGAGTGTCGTAGA 66837 Query 222366 TGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGG 222425 |||| || || ||||| ||||| | | | | ||| || || || ||||| |||| |||| Sbjct 66838 TGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGG 66897 Query 222426 TGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 | || ||||| || || ||||| ||| || || ||||| Sbjct 66898 GTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA 66940 >seq47 Length=84389 Score = 167 bits (184), Expect = 4e-36 Identities = 185/247 (75%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 || || ||| ||| ||| | ||||| ||||| ||||||| || ||||||||| Sbjct 58970 GCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCAAC 59029 Query 25855 AGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTT 25914 | | | | || |||| |||||| ||||| ||||||||||| || ||||| ||||| Sbjct 59030 GACGAAGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTC 59089 Query 25915 TTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTG 25974 ||| ||| || || || ||||||||||||||||| || || ||||||||| || Sbjct 59090 TTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTC 59149 Query 25975 TACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||| |||||||||||||||||| | ||||||||||| |||| || ||||| ||| || Sbjct 59150 ACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTG 59209 Query 26035 CTCTACA 26041 |||| || Sbjct 59210 CTCTTCA 59216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839343036800