Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq22 168 8e-37 seq47 114 2e-20 >seq22 Length=350823 Score = 168 bits (186), Expect = 8e-37 Identities = 552/847 (65%), Gaps = 22/847 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| || || |||||||||||||| ||| || | Sbjct 67031 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 66972 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 66971 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 66913 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| ||||||||||| | || || ||||| |||||||| || ||| ||||| | Sbjct 66912 TCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACG 66853 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 |||| ||| |||| ||||| | ||||| | | || || ||| ||| ||||| Sbjct 66852 ACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 66793 Query 75450 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | || || || | ||||||| || || ||| | | | | | ||| || Sbjct 66792 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATAC----ATTGCCGGA 66737 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| || | ||||| | || ||||||||||| || ||| ||| || ||| Sbjct 66736 ACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTCGC 66677 Query 75566 TATGTAAATCAAGCGGG-------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 || || |||| | || ||||| ||| | || |||| ||||| | || || Sbjct 66676 TACGTCGATCAGGGTGGCAAACAAGCGTCC--AGGTG-CCTTCGCCATCTACATTGAGCC 66620 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| | || || | |||||||| || | | ||||| || | || |||| Sbjct 66619 CTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGT 66560 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 || | || ||||| | |||| ||||| || ||| | ||||||||||| || || Sbjct 66559 CCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGA 66500 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 || || | ||||| || | || || | || || |||||| | || | Sbjct 66499 ACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTCTCGCTGATGTCTA 66440 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 || || ||||| || || |||||| ||||| || |||||| | || || Sbjct 66439 CGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGCTCGCCGAAC 66380 Query 75859 TGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 || | || | | | | ||||| | || ||||| | | |||||||||||||| | | Sbjct 66379 CGT-CAAGGCCCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAACC 66321 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | | |||||||||||||| ||| ||| ||| ||||||||||| | || || | Sbjct 66320 CTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGCACCA 66261 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 ||||| |||| || || |||||||| || | ||||||| | | ||||||| |||| Sbjct 66260 TCAAGTGCTCCAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAGGTCGCTG 66201 Query 76038 TTTGCAA 76044 | ||||| Sbjct 66200 TCTGCAA 66194 >seq47 Length=84389 Score = 114 bits (126), Expect = 2e-20 Identities = 130/173 (75%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115 || ||| ||| | |||| ||||||||||| |||| ||||| || |||||||||||| Sbjct 59031 ACGAAGACTC-CACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTC 59089 Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175 |||||||| || ||| | | || | ||| | |||||||| ||||||||||| || || Sbjct 59090 TTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTC 59149 Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 |||||| || || || || |||||| |||||||| ||| || ||||| Sbjct 59150 ACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 59202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566095153600