Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq427 102 2e-16 seq22 95.1 4e-14 >seq427 Length=163946 Score = 102 bits (112), Expect = 2e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 251410 AGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCC 251469 |||||||| | | ||||||||||| | ||| || ||| |||||| | | || || Sbjct 131471 AGACCACAGATGTCACACACATGGAGCCGGTACGCGTCACTGGCGTCAAACATTCGCTCC 131412 Query 251470 TTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGA 251529 || |||| || |||||| || ||||| |||||||||||||| || ||||||||| Sbjct 131411 TTCAAGAAGGAAGCCATACCGTGCGAGATCATGCAATCACGCTCCATCTCTCCGAAACGA 131352 Query 251530 AGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 |||||||| || ||| | |||||| | |||||||| || Sbjct 131351 AGACCACCGTCACGACTACGACCCTCCACGGGCTGACGCGT 131311 >seq22 Length=350823 Score = 95.1 bits (104), Expect = 4e-14 Identities = 342/525 (65%), Gaps = 10/525 (2%) Strand=Plus/Plus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||||||| || | ||||| ||||||||| || | |||||||||||| | ||||| | Sbjct 66219 CGCTGTACTCCATGATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTT 66278 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || || | ||| ||| |||||||| || ||| | ||| | || |||||| ||| Sbjct 66279 GGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCT 66338 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCT 155804 | || || |||| ||| || | |||| || | | | | | | || Sbjct 66339 GAGCCTCGAGAACGGCGTACCAAAGCTTTTGGGCCTTGA-CGGTTCGGCGAGCACGACCC 66397 Query 155805 TCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864 || ||| || ||| || || | | | || || ||||| |||| || || Sbjct 66398 TCACGCTCGTACTTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCG 66457 Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAA 155923 ||||||| | ||||||| | |||||||| | | | | | | | || |||| ||| || Sbjct 66458 GGGCACTCAGCGGGGCACATCAGCGACC-ACTCTCCGTTCTGTTCGACTCGCTTCATGAA 66516 Query 155924 TACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGT 155982 | ||| ||||| || ||||| || || | | || || |||||| | ||||| Sbjct 66517 CAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCAC-GGGCTCGGACCTCCTCCTTGCCGT 66575 Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042 | ||||||| || || | ||| || | |||| || ||||| | || || | Sbjct 66576 GGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGG 66635 Query 156043 CAAAACTACC---ATTCCT-CTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAG 156098 | || ||| | | | |||||||||||||| || || ||||| || || |||||| Sbjct 66636 CGAAGGCACCTGGACGCTTGTTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAG 66695 Query 156099 ACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCG 156143 || | |||||||| | ||||| || || || || |||||| Sbjct 66696 ACGCGAAGCATAGGCACGATACCGTTAGAGACACCGTTAGTTCCG 66740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808736898390