Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq22 181 1e-39 seq47 159 4e-33 seq264 134 2e-25 seq450 109 7e-18 seq441 102 1e-15 seq331 87.8 2e-11 >seq22 Length=350823 Score = 181 bits (200), Expect = 1e-39 Identities = 275/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| ||||||||||| || |||| ||| |||||||| ||||| ||||||| ||||| || Sbjct 66665 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 66724 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || || || | ||| | ||||| | || | ||| | | ||| Sbjct 66725 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 66784 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || |||| |||| ||| | ||||| ||||| |||||||||||||| || Sbjct 66785 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 66844 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 |||||||||| |||||||| || || |||||||| || |||| |||| | || || Sbjct 66845 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 66904 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| ||| | ||||||| || ||| || Sbjct 66905 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 66964 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || | || |||| || || | ||| | | ||||| || || Sbjct 66965 GTCG------------ATGGCCTCGT---CGATGGAACTCCCGTGGATGCCGACAGCAAC 67009 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||||| ||||| |||||| |||| Sbjct 67010 TCGCATGAGCATGTGTTGGGGGCGCTCGGCGAC 67042 Score = 96.9 bits (106), Expect = 4e-14 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || ||| ||||||||||||||||||||| ||| Sbjct 66528 TCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 66587 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 ||||||| | |||| | ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 66588 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC 66645 >seq47 Length=84389 Score = 159 bits (176), Expect = 4e-33 Identities = 210/286 (73%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| |||| ||| ||||||||||| || ||||| Sbjct 59185 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 59126 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 59125 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 59066 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | || ||||||||||||||| || | | || | ||||||||| || ||||| Sbjct 59065 GGCAACCAGGCGCTCGGCAAAGGTG--GA-GTCTTCGTCGTTGATCCAGCGCAGGGCCCA 59009 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 |||||||||| | | | |||| || | || || || ||| ||||||| || | Sbjct 59008 CTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCT 58950 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||| | || |||||||| ||||| || || ||||| Sbjct 58949 GTGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTC 58904 Score = 118 bits (130), Expect = 1e-20 Identities = 165/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712 ||| ||||||||||| ||| | ||||||| | |||||||| ||||||| | Sbjct 58806 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTC 58747 Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772 | | ||||||||| |||||||| || |||||||| || || |||||||| |||| Sbjct 58746 GACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCGAAGAATGCGAGGACGTGGCTGAT 58687 Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGTC 869829 ||||| ||||||| |||| | | | |||||| | |||| | ||||| Sbjct 58686 GAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTC 58627 Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880 | ||||||||| ||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 58626 GATCTCCTCGGCCGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 58576 Score = 95.1 bits (104), Expect = 1e-13 Identities = 111/149 (74%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 59468 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 59409 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| ||||| | | ||||| || || |||||||| ||||||||| Sbjct 59408 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCG-TCAGCGACAAATTCGATGTAC 59350 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||| ||| || | |||||||||||||| Sbjct 59349 TGGCTCATAAGTCGTGCGTTCATGCCGAT 59321 >seq264 Length=204562 Score = 134 bits (148), Expect = 2e-25 Identities = 271/401 (68%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 ||||| |||| |||||||| ||| | || |||||||||||| |||| || || || Sbjct 115196 GTCACAACCTACGGCGAGTCTCACTGCGCCTCTGTCGGCTGCATCGTCGATGGTGTTCCC 115137 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| | ||| | || | || | |||| ||||| ||| | || || ||||| ||| Sbjct 115136 CCGGGTATGGCCCTCTCTGATGACGACGTCCAGGTCCAGCTCAGCCGTCGTCGACCCGGC 115077 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| ||||| || || ||| |||||||| || Sbjct 115076 CAGTCCAACCTGACCACCCCGCGCGACGAGAAAGACCGAGTCCAGATCCAGTCCGGTGTC 115017 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 || || ||| |||||||||| | ||| | | | | || |||| || || ||| Sbjct 115016 GAAAAGGGCATCACGCTCGGAACTCCCATTGCCATGCGCGTCCAGAACCAGGATCAACGG 114957 Query 18328 CCCGTCGACTATTCCGA---CATGTGCAAGGTG---CCGCGGCCCTCACACGCCGACTAC 18381 ||| |||||| | || || | | | || ||||| ||||| ||||| |||||| Sbjct 114956 CCCAACGACTACACGGACCGCACGCTCGACTTGTACCCGCGTCCCTCTCACGCTGACTAC 114897 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| ||||||| ||||| ||||| ||| || || || Sbjct 114896 ACCTACCTCGAGAAGTACGGTGTCAAGGCTAGCTCGGGTGGAGGACGGAGCTCGGCTCGG 114837 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| | ||| || || || ||||| || || ||||| Sbjct 114836 GAGACGATTGGGCGTGTGGCTGCAGGCGCCGTGGCGGAGAA 114796 Score = 87.8 bits (96), Expect = 2e-11 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 || ||||| || || ||||| || ||| |||||||| |||||| ||||||||||| || Sbjct 114467 GGTCTCGGTGAACCATGCTTCGATAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCTCC 114408 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| || ||||||| |||||| ||||| ||| || Sbjct 114407 ATCCCCGCTACCAAGGCCTTCGAGGTTGGCTCCGGCTT 114370 >seq450 Length=129833 Score = 109 bits (120), Expect = 7e-18 Identities = 189/267 (71%), Gaps = 16/267 (6%) Strand=Plus/Minus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| ||||||||| || || || |||||||||| | |||||| |||| Sbjct 25420 TCATCAACATCTCCCAGATGTCCGCTTGTGTCGGCCAGCAGATCGTCGAGGGCAAGCGTG 25361 Query 508974 TCCACTCCGAGTCGGGCTCGCGCACCCTGGGCTGCTACCGGCA---CGCCGAGGCCGTGC 509030 | | || ||||| || ||| || |||||| || | | ||| || | Sbjct 25360 TGCCCT-----TCGGGTTCCGATACC---GGACGCTACCA-CATTTCACAAAGGACGA-C 25311 Query 509031 CGCCG-CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGC 509089 | | |||||||| || ||||||||| |||||||| ||| || |||| | | Sbjct 25310 TTCAGTCCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAG 25251 Query 509090 GAGATGTTTCTGCACATGATCGGCGGG-CGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 ||| | || | ||| || |||||| |||||||| ||| |||||||||| |||||||| Sbjct 25250 GAGTTCTTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGAC 25192 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCG 509175 |||||||||||| ||||| ||||| || Sbjct 25191 GGCCGAGACGGGATACATTCAGCGACG 25165 >seq441 Length=137317 Score = 102 bits (112), Expect = 1e-15 Identities = 149/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGC--GTGCC 1254400 || ||| ||||| ||| | | ||| || || || ||||| ||||||||||| | | Sbjct 26555 GCTTGGAGAGTTCACCGGGGAGGATAAGTCGGACAGCGGTTTGGATCTCGCGGCAGAGAT 26614 Query 1254401 GATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | ||| || |||||| || || || | ||||||| ||| |||||| |||| Sbjct 26615 GGTCGACTT---CTTGTTGTAGGATGCAAGCTTGGAGGCCTCGATGC-GATGCGCTCGAA 26670 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 ||||| | ||| || ||||||| || | ||| | |||||| ||||| || |||||| Sbjct 26671 GATGTCTTGGACGAAGGAGTTCAGGATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGG 26730 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||| || ||||||| Sbjct 26731 GTGCACCTGCTTGAGGACACGGTAGATG 26758 >seq331 Length=490310 Score = 87.8 bits (96), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || ||||| || ||||||||||| | | || Sbjct 316398 GCTTGGAGAGTTCACCGGGGAGGATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGA 316339 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| | || || | || |||| ||||||| |||| | Sbjct 316338 TGGTGCTCTTCTTGTTGTATGATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGA 316279 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | || || ||||| | || | ||| | |||||||||||| || |||||||| Sbjct 316278 TGTCTTGTACGAAGGAGTTGAGGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGT 316219 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || |||||||| || ||||||| Sbjct 316218 GGACTTGCTTGAGGACACGGTAGATG 316193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107100629598990