Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq52 100 2e-16 seq16 98.7 8e-16 >seq52 Length=81947 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 ||| || | |||||| || || |||| |||||| ||||||| |||||||||||||| Sbjct 37102 CGGGCGACTAAGCGCGCGAGCAATGTCGGTCATGTTTGCGATGACGGTCTTGATGCCGTT 37161 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 ||||| ||||| | ||||| || | | ||||| ||||||||||||||| |||| Sbjct 37162 TCCCTTGCCTTCAATCTTGGTCTGGAGGAGGGGCATCTTGTAGCGGTAGAACTTGTCCTG 37221 Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||| | |||||| |||||| |||| Sbjct 37222 GACATCTCTACGAACGTTAACAGTCGCCAT 37251 >seq16 Length=163030 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CCTGA 110331 ||||| || || ||||| || | |||||||| || || || ||||| ||| ||| | Sbjct 128570 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 128511 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || ||| ||| | | || || |||||| ||||| || ||| | || |||||| Sbjct 128510 -GACACTATCGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGATCA 128452 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || | || | || || || ||||||||||| | | ||||| || |||| ||||| Sbjct 128451 GCAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGAACATTGTCGGACTACAA 128392 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||| || || || ||||| |||| | | ||||| || || Sbjct 128391 CATTCAAAAGGAGTCAACTCTGCACTTGGTTCTCCGCCTGCGTGGTGG 128344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839235191710