Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq47 174 2e-37 seq441 147 3e-29 seq22 136 6e-26 seq331 129 9e-24 seq450 107 3e-17 seq14 100 5e-15 >seq47 Length=84389 Score = 174 bits (192), Expect = 2e-37 Identities = 219/300 (73%), Gaps = 3/300 (1%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| ||| ||| ||||||||||| || ||||| Sbjct 59185 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 59126 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 59125 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 59066 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||||||||||| ||| | | || | ||||||||| || ||||| Sbjct 59065 GGCAACCAGGCGCTCGGCAAAGGTG---GAGTCTTCGTCGTTGATCCAGCGCAGGGCCCA 59009 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||||| | | || ||| | || || || ||| ||||||| || || Sbjct 59008 CTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCTG 58949 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | ||||| | ||| |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 58948 TGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTC 58889 Score = 111 bits (122), Expect = 2e-18 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | | |||||||| |||| || || | |||||||| |||||||| Sbjct 58781 GCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTCGACGAGGTTCTCGTTGACGATGCCA 58722 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||||| || ||||||||||| |||| ||||| ||||||| |||| | | | Sbjct 58721 TCTGACGCGGCGAAGAATGCGAGGACGTGGCTGATGAAGTGTCGCTCGTTGTCGTTCAAC 58662 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | ||||||| ||||||||| ||||| || || Sbjct 58661 TTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCGGCCGTCCAGAACGAT 58602 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 58601 GCCTCTGCCTTCTTGTACATTTGCCAGATC 58572 Score = 86.0 bits (94), Expect = 1e-10 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 59468 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 59409 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 ||||||||||||| |||||| | | ||||| || || ||||| ||||| |||||| Sbjct 59408 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCG-TCAGCGACAAATTCGATGTAC 59350 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGAT 794077 |||| ||| || |||||||||||||| Sbjct 59349 TGGCTCATAAGTCGTGCGTTCATGCCGAT 59321 >seq441 Length=137317 Score = 147 bits (162), Expect = 3e-29 Identities = 176/236 (75%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||| |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 26517 GTACTTGGTGACGGACTTGGTTCCCTCAGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 26576 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGG--GTGCCGATCGTGTTGCGCTTGTTAGTG 1485588 ||| || || || ||||| |||||||||||| | | | ||| || |||||| | Sbjct 26577 GATAAGTCGGACAGCGGTTTGGATCTCGCGGCAGAGATGGTCGACTT---CTTGTTGTAG 26633 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || || | ||||||| || ||||||| |||| ||||| | ||| || |||||| Sbjct 26634 GATGCAAGCTTGGAGGCCTCGATG-CGATGCGCTCGAAGATGTCTTGGACGAAGGAGTTC 26692 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 | ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 26693 AGGATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 26748 >seq22 Length=350823 Score = 136 bits (150), Expect = 6e-26 Identities = 185/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| ||||| || |||| ||| |||||||| ||||| ||||| | ||||| || Sbjct 66665 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 66724 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||| || || || | ||| | ||| | | || | ||| | | ||| Sbjct 66725 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 66784 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || |||| |||| ||| | ||||| | || || || ||||||||||| || Sbjct 66785 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 66844 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| |||||||| | ||| |||||||| || |||| ||| | || || Sbjct 66845 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 66904 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || |||||||| ||||| Sbjct 66905 AGCGTTGAAGAGGGTGGG 66922 Score = 102 bits (112), Expect = 1e-15 Identities = 272/417 (65%), Gaps = 6/417 (1%) Strand=Plus/Plus Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAG 2071640 || ||| ||||||||||||| || | ||||||| ||||||| ||||| | | Sbjct 66232 GATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCG 66291 Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700 |||| | |||||||||| |||||| | || || ||||| |||| ||| || | Sbjct 66292 GTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAAC 66351 Query 2071701 GGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNN 2071758 ||| |||||| ||| | || | | || | || || |||| Sbjct 66352 GGCGTACCAAAGCTTTTGGGCCTTGACGGTTCGG--CGAGCACGACCCTCACGCTCGTAC 66409 Query 2071759 NNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGAC 2071818 |||| || || || || |||||| | || || ||||| ||| | Sbjct 66410 TTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCG 66469 Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCGCACGT 2071877 ||||| | |||||||| || ||| | || | || || ||| |||| ||| | Sbjct 66470 GGGCACATCAGCGACCACTCTCCGTTCTGTT-CGACTCGCTTCATGAACAAGTCAGGGAT 66528 Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 ||| ||| |||| ||||| || || || ||| ||||||||||||||||||||| | || Sbjct 66529 CCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAG 66588 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994 |||||| | |||| || ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 66589 GTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC 66645 >seq331 Length=490310 Score = 129 bits (142), Expect = 9e-24 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 316436 GTACTTGGTGACCGACTTGGTCCCCTCCGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 316377 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || ||||| || ||||||||||| | | ||| ||| | |||||| || | Sbjct 316376 GATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGATGGTGCTCTTCTTGTT-GTATG 316318 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || | || |||| ||||||| |||| ||||| | || || ||||| | Sbjct 316317 ATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGATGTCTTGTACGAAGGAGTTGA 316258 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||||||||| || ||||||||| || |||||||| || Sbjct 316257 GGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACTTGCTTGAGGAC 316203 >seq450 Length=129833 Score = 107 bits (118), Expect = 3e-17 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| || ||||||||| |||||||| ||| || |||| | | ||| | Sbjct 25304 CCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAGGAGTTC 25245 Query 431082 TTTCTGCACATGATCGGCGGG-CGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 || | ||| || |||||| |||||||||||| |||||||||| |||||||||||||| Sbjct 25244 TTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGACGGCCGA 25186 Query 431141 GACGGGCTACATCCAGCGTCG 431161 |||||| ||||| ||||| || Sbjct 25185 GACGGGATACATTCAGCGACG 25165 >seq14 Length=101787 Score = 100 bits (110), Expect = 5e-15 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 |||||||||||| | || ||| || |||||||||| | |||| || || || ||| Sbjct 54807 TCAATCTTGGAGTCCGCATCGGAGGAGCTCATCTTGGAGCCCTTA---AGACCGGGTACC 54863 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | ||| | || ||| |||||| |||||| ||| |||||| || ||| Sbjct 54864 ATGGCGTTCATGAGATGGGCGCGCTTTGCGTAGCCGAGCTTAGGCAGGACCTCCTCGGCA 54923 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | ||||| || ||||||||| || || || ||| ||||||| |||||| |||| Sbjct 54924 AGGACGAAGATTTTTCGCTGGTCGACACCTCCGAATTGGAAGTCGACGCCGAGGTACTGC 54983 Query 2411566 TCGTCGAGGGCCTGCATGAGC-GGGTAGACGAG 2411597 |||||||| || || | || | ||||||| ||| Sbjct 54984 TCGTCGAGCGCTTGGA-GACCGGGGTAGATGAG 55015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916196403956330