Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq16 107 2e-18 >seq16 Length=163030 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || ||||| || || || ||||| ||| | Sbjct 128570 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 128511 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | | || || |||||| || || || ||| | || ||||||| Sbjct 128510 GACACTATCGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGATCAG 128451 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| || | || | || || || ||||||||||||| | |||| || ||||||||||| Sbjct 128450 CAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGAACATTGTCGGACTACAAC 128391 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||||||||||||| || ||||| |||| Sbjct 128390 ATTCAAAAGGAGTCAACTCTGCACTTGGT 128362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107568 GTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCGGC 107627 ||||| ||| | || ||||| ||||| ||| |||| ||| | || || | | | Sbjct 129014 GTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATTGAC 128955 Query 107628 CAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATT 107687 | || || |||||| ||||| || ||| | || ||| |||||| | || || Sbjct 128954 AACGTCAAGACAAAGATCCAAGATAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCATC 128895 Query 107688 TATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAG 107747 | ||| || || ||||| ||||||| | |||| || ||||||||||||| || |||||| Sbjct 128894 TTTGCCGGCAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGAG 128835 Query 107748 TCTACGTTGCACATGGT 107764 || || |||||| |||| Sbjct 128834 TCCACATTGCACTTGGT 128818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874515183830