Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq16 111 3e-19 >seq16 Length=163030 Score = 111 bits (122), Expect = 3e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || ||||| ||||||||||| || || || || || || || || | Sbjct 128342 TACCACCACGCAGGCGGAGAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCG 128401 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | ||| ||||| || || || || || || ||||| | || || ||||| |||| Sbjct 128402 ACAATGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAG 128461 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCT 82760 | || || ||||| || |||||||| | || || || || || || || | ||| || Sbjct 128462 GGATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTC-TGAGGACTCG 128520 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | || || |||||||| || | ||||| || || |||||||| Sbjct 128521 ACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 Score = 100 bits (110), Expect = 6e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || || || || || || ||||| || || || || ||||| || | | || Sbjct 134137 ACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCC 134078 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || || || || ||||| | || |||||||| ||||| || || ||||| Sbjct 134077 ATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTT 134018 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTA 82773 ||||||||||| | || || || || || || || | ||| || ||||| | || | Sbjct 134017 GTCTTGAATCTTGGTCTTGACGTTGTCGATAGTGTC-TGAGGACTCGACTTCGAGTGTGA 133959 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || | ||||| || || |||||||| Sbjct 133958 TTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || ||||||| || || || ||||| || || || || | Sbjct 128798 TACCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCG 128857 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | ||| ||||| || || || || || |||||||| || | || || || |||| Sbjct 128858 ACAATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAG 128917 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||||| || || || ||||| || || | || | Sbjct 128918 GAATGCCCTCCTTATCTTGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAA 128977 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 | || | || || |||||||| |||| ||||| || Sbjct 128978 CCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 129014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981821287559330