Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq16 123 6e-23 seq136 91.5 3e-13 seq418 87.8 4e-12 >seq16 Length=163030 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || |||||| | ||||| || || || ||| Sbjct 128339 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCCGAC 128280 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || || || ||| |||||| ||| Sbjct 128279 ACCATTGATAACGTCAAGACGAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAACAA 128220 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||||||||| ||||| | || | ||||||||||| || Sbjct 128219 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 128160 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||||||| Sbjct 128159 CAGAAGGAGTCCACTCTTCAC 128139 Score = 113 bits (124), Expect = 1e-19 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || |||||| | || |||||| || ||| Sbjct 133697 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGAC 133756 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || |||||| || Sbjct 133757 ACCATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 133816 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| ||||||||||| ||||| | ||| | | ||||||||| || Sbjct 133817 CGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATC 133876 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| || |||||| | ||| Sbjct 133877 CAGAAGGAGTCAACGCTTCACTTGGTT 133903 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || |||||| | || |||||| || ||||| |||| Sbjct 128783 AAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGACACCATCGACAAC 128724 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || |||||| || | ||||||||| Sbjct 128723 GTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTTATCTTC 128664 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||||||||| ||||| | ||| | | ||||||||| ||||||| ||||| Sbjct 128663 GCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCA 128604 Query 206365 ACTCTTCACCTTGTT 206379 || |||||| | ||| Sbjct 128603 ACGCTTCACTTGGTT 128589 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| || || ||| Sbjct 133925 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCAGAC 133984 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || ||| ||||| || Sbjct 133985 ACTATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAACAG 134044 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||| || ||||||||||| ||||| | || | | || |||||| || Sbjct 134045 CGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAACATC 134104 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || |||||||| || ||||| Sbjct 134105 CAAAAAGAGTCCACACTTCA 134124 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| || || ||| Sbjct 133469 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCCGAC 133528 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || |||||| ||| Sbjct 133529 ACTATCGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAACAA 133588 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| |||||| | ||||| ||| | || | | || |||||| || Sbjct 133589 CGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAACATC 133648 Query 206353 CAGAAAGAGTCTAC 206366 ||||| ||||| || Sbjct 133649 CAGAAGGAGTCCAC 133662 >seq136 Length=51868 Score = 91.5 bits (100), Expect = 3e-13 Identities = 135/190 (71%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || |||||||| | || || || || ||| | |||| | Sbjct 49395 CAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGACGC 49454 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||| ||| |||||| || | || ||||| Sbjct 49455 CGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCC-CCGGACCAACAGCGTCTCATCTT 49513 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || || || | ||| | |||| |||||| ||||||| ||||| Sbjct 49514 CGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAGTC 49573 Query 206364 TACTCTTCAC 206373 ||||||||| Sbjct 49574 CACTCTTCAC 49583 >seq418 Length=175290 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | || ||||| ||| ||| Sbjct 55079 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 55020 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || ||| || || || || || ||||| || |||||| || Sbjct 55019 TCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 54960 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| ||||||||||| |||||| | || || || | ||| | | || |||||| || Sbjct 54959 CGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACATC 54900 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||| ||||| || Sbjct 54899 CAGAAGGAGTCGACTCTCCACCTCGT 54874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181813683222870