Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq16 116 3e-21 seq418 89.7 5e-13 >seq16 Length=163030 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||||||||||||||| || | Sbjct 127888 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 127947 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| ||||| || ||||| ||||||||||||| || Sbjct 127948 AGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGG 128007 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| ||| | | | | | ||||| ||||||||| Sbjct 128008 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 128067 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || || || || |||||||| Sbjct 128068 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| || | ||| ||||| |||| ||||||||||| || || || Sbjct 128379 CTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 128438 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| |||||||| |||| ||| | || |||||||||| ||||| ||| | || Sbjct 128439 GATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTGA-CGT 128497 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || || || | ||||| || || || || | || || | Sbjct 128498 TGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGA 128557 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 128558 CGAAGATCTGCAT 128570 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| || |||||||| || | | Sbjct 128800 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAC 128859 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| |||| || |||||||| || ||||| || | ||||||||||||| |||| Sbjct 128860 AATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGA 128919 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||| || ||||||| ||| | |||| | | ||||| || || || Sbjct 128920 ATGCCCTCCTTATCTTGGATCTTTGTCTTGA-CGTTGTCAATGGTGTCCGAGGACTCAAC 128978 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 ||| | ||||| || || || |||| ||| || || Sbjct 128979 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 129014 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || ||||||||||| | | || || | || ||| Sbjct 128590 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 128649 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || || || || | ||||||||||||| || | | |||||||||| | Sbjct 128650 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 128709 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||||| |||| | | ||||| ||||||||||| | ||||| || || Sbjct 128710 ATCTTCGTCTTCA-CGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTT 128768 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||| ||||| || |||||||| Sbjct 128769 GCCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || ||||||||||| | | || || | || ||| Sbjct 133902 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 133843 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || || || || | ||||||||||||| || | | |||||||||| | Sbjct 133842 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 133783 Query 35648 ATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||||| |||| | | ||||| ||||||||||| | ||||| || || Sbjct 133782 ATCTTCGTCTTCAC-GTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTT 133724 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || |||||||| Sbjct 133723 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 133694 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || |||| |||||| || || || Sbjct 128151 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 128210 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||||| || || ||||||| ||||| || ||||||||| |||||| Sbjct 128211 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTT 128258 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || |||| || || ||||| || || || Sbjct 133429 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 133370 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||||| ||| | || ||||||||| |||||| ||| | | | Sbjct 133369 GATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 133310 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || |||| ||| || || Sbjct 133309 GTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 133250 >seq418 Length=175290 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || |||| || |||||||| || || || Sbjct 54891 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 54950 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| ||| || ||| | | Sbjct 54951 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 55010 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||| || |||||||| | ||||| || |||||||||| || || || Sbjct 55011 GTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGAC 55070 Query 35725 AAATATCTGCATTCTGTGC 35743 || |||||||| ||| || Sbjct 55071 GAAGATCTGCATGCTGGGC 55089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790951587600