Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq22 167 3e-36 seq47 114 2e-20 >seq22 Length=350823 Score = 167 bits (184), Expect = 3e-36 Identities = 553/849 (65%), Gaps = 26/849 (3%) Strand=Plus/Plus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 ||||| ||||| ||||||| | | ||||||| | || || || || | |||||| Sbjct 66194 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTGGAG 66253 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370 | ||| || || || | ||||||||||| ||| |||| || |||||||| ||| Sbjct 66254 CACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGC 66313 Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGC 111429 ||| | || | || ||||||||||| | | ||||| || | ||||| | | | | | Sbjct 66314 ATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGGGCC 66373 Query 111430 TGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 | | || | |||| || || ||||| ||||||||| |||||| || || ||| Sbjct 66374 TTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAAC 66430 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547 || || || | || | |||||| || || | || || | || ||||| | Sbjct 66431 TCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTCT 66490 Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 || | || || ||||||||||| | ||| || ||||| |||| | ||||| || Sbjct 66491 CCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCA 66550 Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 66551 CGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCA 66610 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-------CCAGCTTG 111720 | |||||| ||||||| |||| |||| | || | ||||| ||| | || Sbjct 66611 GAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTTGCCACCCTG 66667 Query 111721 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 111780 || || ||||| || ||| ||| || ||||||||||| || | ||||| | || Sbjct 66668 ATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGAC 66727 Query 111781 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCATCC 111836 ||| || || || ||| | | | | | ||| || || ||||||| | | Sbjct 66728 ACCGTTAGTTCCGGCAAT----GTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGC 66783 Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896 | || || |||||| ||| ||| || || | | ||||| | ||||| |||| Sbjct 66784 CGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGT 66843 Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956 ||| ||||| ||||| ||| || |||||||| ||||| || || | ||||||| Sbjct 66844 CGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTAC 66903 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 112015 |||| ||||||||||| || | || || |||| ||| | | ||||| || ||| Sbjct 66904 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGTAA 66962 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 || || | | | || ||| |||||||||||||| || || ||||||| |||| Sbjct 66963 GTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCATG 67022 Query 112076 TACTGTGGG 112084 | || ||| Sbjct 67023 TGTTGGGGG 67031 >seq47 Length=84389 Score = 114 bits (126), Expect = 2e-20 Identities = 128/170 (75%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||||| || || || || |||||| ||||| Sbjct 59202 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 59143 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||| | ||| | || | | ||| || ||||||||||||||| Sbjct 59142 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 59083 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTT 122828 ||||| || ||||| |||| ||||| ||||| |||| | ||| ||| Sbjct 59082 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCTT 59034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028310312000