Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq22 170 2e-37 seq47 127 2e-24 >seq22 Length=350823 Score = 170 bits (188), Expect = 2e-37 Identities = 534/815 (66%), Gaps = 24/815 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| || ||||| ||||||| || || |||| || || ||| ||| || | Sbjct 67031 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 66972 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 66971 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 66913 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| ||||||||||| | || |||||||| |||||||| || ||| ||||| | Sbjct 66912 TCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACG 66853 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 |||| ||| |||| ||||| | ||||| | | || || ||| ||| ||||| Sbjct 66852 ACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 66793 Query 104460 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 | || || || | ||||||| || || ||| | | | | | ||| || Sbjct 66792 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATAC----ATTGCCGGA 66737 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || || ||| || | ||||| | || ||||||||||| || ||| ||| || ||| Sbjct 66736 ACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTCGC 66677 Query 104576 TATGTAAATCAAGCTGG-------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCC 104628 || || |||| | ||| ||||| | || | |||| |||| ||||||| Sbjct 66676 TACGTCGATCAGGGTGGCAAACAAGCGTCCA---GGTGCCTTCGCCATCTACATTGAGCC 66620 Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 |||||| | || || | |||||||| || | | ||||| || | ||||||| Sbjct 66619 CTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGT 66560 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 104748 || ||| || ||||||| ||| || ||||| || || | ||||||||| |||| || Sbjct 66559 CCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGA 66500 Query 104749 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT 104808 ||| || | ||||| || | || || | || || |||||| | |||| | Sbjct 66499 ACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTCTCGCTGATGTCTA 66440 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-A 104867 || || ||||| || || || ||| ||||||||| || ||||| || | || | Sbjct 66439 CGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGC-TCGCCGAA 66381 Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | || | || | | | | ||| | || ||||| || |||| || |||||||| | Sbjct 66380 CCGT-CAAGGCCCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAAC 66322 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||||||||| ||||| |||| ||| || |||||||| | || Sbjct 66321 CCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGCACC 66262 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGA 105021 |||||| | ||||| || || || || ||| |||| Sbjct 66261 ATCAAGTGCTCCAACCTGTGCACGGAGATCATGGA 66227 >seq47 Length=84389 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| ||||| || | || ||||| || ||||||||||||||||| || || | Sbjct 59043 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 59102 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 59103 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 59162 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||| || |||||||| || ||| || ||||| Sbjct 59163 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 59202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257373342800