Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq22 277 2e-69 seq124 98.7 1e-15 >seq22 Length=350823 Score = 277 bits (306), Expect = 2e-69 Identities = 481/690 (70%), Gaps = 7/690 (1%) Strand=Plus/Minus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || ||| | || ||||| |||||||||||||| ||||||| ||| Sbjct 66943 AAGTACTTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATG 66884 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || ||||||||||| | |||||||| ||||||||||||||||||||||| || ||| Sbjct 66883 TCATCGTGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTC 66824 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTC 53446 ||| || ||| ||| |||| | | ||||| ||||| || || | | || Sbjct 66823 AAGACCTGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATC 66764 Query 53447 CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATG 53506 |||| | |||| || || || || ||||| ||| | | || |||||||||||| Sbjct 66763 CGTGGTACCGGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATG 66704 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG-TGGGAAGCG-CAAGG 53564 || ||||||||||||||||| || || |||||| | |||||||| ||||| | ||| Sbjct 66703 CTTCGCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAAACAAGCGTCCAGG 66644 Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624 | | |||||||||||| | ||||| |||||| | ||| | | ||||| ||||| || Sbjct 66643 TG-CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCA 66585 Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATT 53683 | ||| || || | || ||| | || |||||| || || ||| || || ||||| Sbjct 66584 GGAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTAC-GCCCTTTGGATC 66526 Query 53684 CCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAAC 53743 || ||| | |||||| | || || || ||| ||||||| ||||||||||| Sbjct 66525 CCTGACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCT 66466 Query 53744 GAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTAC 53803 ||||||||||| ||| | ||||||||| || ||||| | | | || || |||| Sbjct 66465 GAGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTAC 66406 Query 53804 GCAGTTCAGGGCCGCTACAAGAAGAA-GGTCAAGGCGCGTGAGGTATGGGATGCAATCCT 53862 | | |||| || | | | ||| |||||||| | || | ||| | || | || Sbjct 66405 GAGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGCCCAAAAGCTTTGGTACGCCGTTCT 66347 Query 53863 CAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAA 53922 | || ||| |||||| || | || | |||| |||||||| | | |||| || Sbjct 66346 CGAGGCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAA 66287 Query 53923 GAGCAACCAGAAGAACATCGGCGTCATCAA 53952 | ||||| |||||| ||||| |||||| Sbjct 66286 GTCGAACCAAAAGAACCTCGGCACCATCAA 66257 Score = 95.1 bits (104), Expect = 1e-14 Identities = 308/464 (66%), Gaps = 27/464 (6%) Strand=Plus/Minus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 || || || |||||||| || | || || ||||| ||||| ||||| ||||||| | Sbjct 65739 GGTCTCCGAAACTCCCTCCTGCTCGCCCCTATGCCCACCGCTTCGACAAGTCAGATCCTC 65680 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||| ||||||| || ||||| ||||||| |||| | ||| || || || || Sbjct 65679 GGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGACGTGTGCTCGCC 65620 Query 55598 GGTGAGTTTGTCATGATCAACAA---GCACCT-CGTCAAGGACCTGCAG-AAGATCAACA 55652 || ||||| | ||||| || || ||| | | | || ||| || Sbjct 65619 GGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGA-GCTTGTCGAGCAAGGTCT--- 65564 Query 55653 AGTGGAACCCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATC 55709 ||||||| |||||| |||| || || || | | |||| || || | ||||| Sbjct 65563 -GTGGAACGAGCAGATGAAGAACCGCATCATAGCCC---ACGGCGGCTCGATTCAGAACG 65508 Query 55710 TG---GAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA 55766 || | ||||| || |||||| | ||| ||| ||||||||||| | |||| Sbjct 65507 TGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTCGCAGA 65448 Query 55767 AGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTG 55825 || ||| | || |||||| ||| || || ||||| | ||| ||| || || |||| Sbjct 65447 AG-GTCATCATCGACATGGCTGCCGACCGAGGTGCCTTTATCTGCCAATCTCAAAGTCTG 65389 Query 55826 AACATCTTCATGGA-GAATCCTTCACTGGCCAAGTT--GAGCTCGATGCACTTTTACGGG 55882 |||||| | | | | | || | |||||| || |||| |||||||| ||||| Sbjct 65388 AACATCCACCTCCAAGCACCCAGCTTTGGCCAGCTTACGAGC---ATGCACTTCTACGGC 65332 Query 55883 TGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 |||||||||||| | |||||||| | ||||| || || ||||| Sbjct 65331 TGGAAGAAGGGATTGAAGACGGGAACATACTACCTCCGAACCCG 65288 >seq124 Length=57796 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/203 (72%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTG--GCCGCATCCTTGCCACC--TGCCAGCCGCGTTCCAAA 152084 ||||| ||||| || ||||| ||||| ||||||||||| || || || || || || Sbjct 15633 GTGAAAATGTAACG--AGCTGAGGCCGCGTCCTTGCCACCCATGGCA--CGAGTGCCGAA 15688 Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 ||| || ||| |||||| |||| ||||| ||||| ||| | ||||||||||| Sbjct 15689 CTGACCGATGGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATT 15748 Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204 ||||||||| |||||||| || ||||| || || || || ||||| | | || Sbjct 15749 TACAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACATA 15808 Query 152205 TCCCGCCAACTGCGCCACCTTCA 152227 || ||||| || || |||| || Sbjct 15809 ACCAGCCAATTGGGCAACCTGCA 15831 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAG--ACGCGTACCGAATT 117362 |||||||||||||||| || || ||||||||||| || | ||| || ||||| | Sbjct 15633 GTGAAAATGTAACGAGCTGAGGCCGCGTCCTTGCCACC--CATGGCACGAGTGCCGAACT 15690 Query 117363 GTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 | || | || | | || ||| ||||| ||||| |||| ||||||||| || | Sbjct 15691 GACCGATGGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATTTA 15750 Query 117423 CAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482 ||||||| ||| || || ||| || || || || || || ||||| |||| || | Sbjct 15751 CAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACATAAC 15810 Query 117483 CCGCCAGCTGAGCCACCTTCA 117503 | |||| || || |||| || Sbjct 15811 CAGCCAATTGGGCAACCTGCA 15831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212785106000