Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq16 203 8e-47 seq111 167 5e-36 seq136 159 8e-34 seq418 156 1e-32 >seq16 Length=163030 Score = 203 bits (224), Expect = 8e-47 Identities = 172/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| ||||| | |||||| | ||||| Sbjct 128131 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 128190 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| | ||||||||||| ||||||| || |||||||| Sbjct 128191 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCT 128250 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || |||||||| ||||| || || ||||||||||| ||| Sbjct 128251 TGGATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACTTCGAGAGTGATAGTC 128310 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 128311 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128342 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| ||||| | ||| || | ||||| Sbjct 128587 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 128646 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||||||||| || ||||| || || | || ||||||||| Sbjct 128647 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 128706 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| || ||| ||||| |||||||| ||| Sbjct 128707 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 128766 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 128767 TTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| ||||| | ||| || | ||||| Sbjct 133905 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 133846 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||||||||| || ||||| || || | || ||||||||| Sbjct 133845 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 133786 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| || ||| ||||| |||||||| ||| Sbjct 133785 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 133726 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 133725 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133694 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||||||||| ||||| ||||| || |||| |||||| | |||||| Sbjct 127903 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCT 127962 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| || || | || ||||||||| Sbjct 127963 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 128022 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||| || ||| |||||||| ||||| ||| Sbjct 128023 TGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 128082 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 128083 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 170 bits (188), Expect = 4e-37 Identities = 156/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 |||||||| || |||||||| || |||| ||||| | ||| ||||| ||||||||||| Sbjct 133662 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCG 133603 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | ||||||||||| ||||| | || ||||||||||| ||||| || Sbjct 133602 GCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTG 133543 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| ||| ||||| ||||| ||||| ||||| || ||||| ||| Sbjct 133542 ACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 133483 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 133482 TTGACGAAGATCTGCAT 133466 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||| |||||||||||||||||||| || || | |||||| | ||||| Sbjct 134133 AGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 134074 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| | || ||||| || ||||||| || |||||||| Sbjct 134073 TCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCT 134014 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| ||| || || ||||| ||||| ||| Sbjct 134013 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 133954 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 133953 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| || |||||||| ||||| | |||||| | || || Sbjct 133449 AGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 133390 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || |||||||| ||||| | || |||||||| Sbjct 133389 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 133330 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| ||| ||||||||||| ||||| ||| Sbjct 133329 TGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 133270 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 133269 TTGCCAGTCAGAGTCTTAAC 133250 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | |||||||| || |||||||| || |||| | || | || || Sbjct 128815 AGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCC 128874 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| ||||||| || ||||| || Sbjct 128875 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCT 128934 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| || |||||||| ||| ||||||||||| ||||| ||| Sbjct 128935 TGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 128994 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 128995 TTGCCAGTCAGAGTCTTGAC 129014 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| ||||| ||||| ||||| || |||| | || | || || Sbjct 128359 AGAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCC 128418 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| | || || || || ||||| | || ||||||||| Sbjct 128419 TCCAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCC 128478 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| ||| || || ||||| ||||| ||| Sbjct 128479 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 128538 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 128539 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 >seq111 Length=618870 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||||| |||||||||||||| || || | || || | || ||| Sbjct 410827 AGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCT 410768 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || || | || |||||||| Sbjct 410767 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCT 410708 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| ||| || |||||||| ||||| ||| Sbjct 410707 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTC 410648 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 410647 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 410616 >seq136 Length=51868 Score = 159 bits (176), Expect = 8e-34 Identities = 156/200 (78%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| || || | || || | || || Sbjct 49591 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 49532 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || |||||||| || |||| |||||||||||| Sbjct 49531 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGG-GGAATACCTTCCTTGTCC 49473 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||| ||||||| ||| || || |||||||| ||||||||| Sbjct 49472 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 49413 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| ||||| || Sbjct 49412 TTGCCGGTGAGGGTCTTGAC 49393 >seq418 Length=175290 Score = 156 bits (172), Expect = 1e-32 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||||| || |||||||| || |||| ||| || | || || Sbjct 54871 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 54930 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | |||||||||||| Sbjct 54931 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 54990 Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||||| ||| || || ||| ||||||| ||| || || |||||||| ||||| || Sbjct 54991 TGGAT-TTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGT 55049 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| || ||||| || || | |||||| Sbjct 55050 CTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 55082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159145019731550