Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq16 131 1e-25 >seq16 Length=163030 Score = 131 bits (144), Expect = 1e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||||||||| ||| | Sbjct 133466 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCC 133525 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || || | || || || ||| ||||| || || | || || || || Sbjct 133526 GACACTATCGACAACGTCAAGAC-CAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCA 133584 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || || || |||||||| || || ||||||| ||| || | || ||||| Sbjct 133585 ACAACGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAA 133644 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||||||||| ||||| ||| Sbjct 133645 CATCCAGAAGGAGTCCACATTGCATTTGGTT 133675 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| |||||||| || ||| | Sbjct 133922 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 133981 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || || | || || || | || ||||| || ||| | || || ||||| Sbjct 133982 GACACTATCGACAACGTCAAGACCAAGA-TTCAAGACAAGGAGGGTATTCCTCCGGATCA 134040 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| || || || || ||||| || |||| || | ||||| | || ||||| Sbjct 134041 ACAGCGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAA 134100 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||||||||||||| | ||||| || Sbjct 134101 CATCCAAAAAGAGTCCACACTTCATTTGGT 134130 Score = 109 bits (120), Expect = 4e-19 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || || || ||||| ||||| || || || | Sbjct 128114 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 128055 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || ||| ||||| || || | || || || || Sbjct 128054 GACACCATCGACAATGTCAAGAC-GAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCA 127996 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATTAC 23787 ||||| || || || || ||||| || || ||||| | |||| |||| | || ||| Sbjct 127995 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCG--GACTAC 127938 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| ||||| |||||||| | ||||| || Sbjct 127937 AACATTCAAAAGGAGTCCACTCTTCATTTGGT 127906 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 |||||| || || || || || || ||||| ||||| ||||| ||| ||||||| | || Sbjct 133249 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 133308 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || || || | | ||||| || || | || || || ||||||||| | | Sbjct 133309 CAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCA 133367 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || |||||||| ||||| || |||| ||||| | |||||||||||| || || | Sbjct 133368 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGG 133427 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||| | || || || Sbjct 133428 AGTCCACACTGCACTTGGT 133446 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || |||||||||||||| || | | Sbjct 128342 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCC 128283 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || | || || || | | ||||| || || | || || || || Sbjct 128282 GACACCATTGATAACGTCAAGACGAAGA-TCCAAGACAAGGAGGGCATTCCTCCGGACCA 128224 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || || || |||||||| || |||| || | ||||| | ||||||||| Sbjct 128223 ACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 128164 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 128163 CATCCAGAAGGAGTCCAC 128146 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 ||| || || || || || || || ||||| ||||| ||||| ||| ||||||| |||| Sbjct 129015 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATTGA 128956 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 || | || ||||| | | || || || || | || || || || ||||| | | Sbjct 128955 CAACGTCAAGACAAAGA-TCCAAGATAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCA 128897 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | ||||||||||| || || || |||| || || || || |||||||| || || | Sbjct 128896 TCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGG 128837 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||||| || || || Sbjct 128836 AGTCCACATTGCACTTGGT 128818 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || |||||||| || || || || | Sbjct 133694 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCA 133753 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | || || || | | ||||| || ||| | || || || || Sbjct 133754 GACACCATCGACAACGTGAAGACGAAGA-TCCAGGACAAGGAGGGTATCCCCCCGGACCA 133812 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || |||||||| || |||| || | |||||| | |||||||| Sbjct 133813 GCAGCGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAA 133872 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 133873 CATCCAGAAGGAGTCAACGCTTCACTTGGTT 133903 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || |||||||| || || || || | Sbjct 128798 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCA 128739 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | || || || | | ||||| || ||| | || || || || Sbjct 128738 GACACCATCGACAACGTGAAGACGAAGA-TCCAGGACAAGGAGGGTATCCCCCCGGACCA 128680 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || |||||||| || |||| || | |||||| | |||||||| Sbjct 128679 GCAGCGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAA 128620 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 128619 CATCCAGAAGGAGTCAACGCTTCACTTGGTT 128589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007663838760