Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq111 152 1e-31 seq136 141 2e-28 seq418 140 8e-28 seq16 140 8e-28 >seq111 Length=618870 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| |||||||||||||||| ||||| |||| | |||| || ||| Sbjct 410827 AGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCT 410768 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || ||||||||||| || || || || ||||||||| Sbjct 410767 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCT 410708 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || || ||||| |||| || || || | ||||| ||| Sbjct 410707 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTC 410648 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 410647 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 410616 >seq136 Length=51868 Score = 141 bits (156), Expect = 2e-28 Identities = 145/188 (77%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| |||||||| || || |||| ||||| |||| | ||| | || || Sbjct 49591 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 49532 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || |||||||| || ||||||||||||||||| Sbjct 49531 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGG-GGAATACCTTCCTTGTCC 49473 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || ||||||| ||| || | || || || | ||||||||| Sbjct 49472 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 49413 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 49412 TTGCCGGT 49405 >seq418 Length=175290 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || || |||| ||||| || | | ||| | || || Sbjct 54871 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 54930 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 54931 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 54990 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| || || ||||||| ||| || | ||||| || | ||||| ||| Sbjct 54991 TGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 55050 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||| || || | ||| | ||||| Sbjct 55051 TTACCCGTCAGGGTCTTGACGAAGATCTGCAT 55082 >seq16 Length=163030 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| |||||||| || || |||| |||||||||| | || | ||||| Sbjct 128131 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 128190 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || |||||||| | |||||||||||| || ||||| || ||||||||| Sbjct 128191 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCT 128250 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || |||||||| ||| | || || || | ||||| ||| Sbjct 128251 TGGATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACTTCGAGAGTGATAGTC 128310 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 128311 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128342 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || |||| |||||||| | | ||| | ||||| Sbjct 128587 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 128646 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || ||||||||||| || || ||||| || || ||||| |||||||| Sbjct 128647 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 128706 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| |||||||||||||| | |||||| || | ||||| ||| Sbjct 128707 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 128766 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 128767 TTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || ||||| || || |||| |||||||||| | || | || || Sbjct 133449 AGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 133390 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| || || |||||||| || || || || ||||||||| Sbjct 133389 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 133330 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| |||| || || || | ||||| ||| Sbjct 133329 TGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 133270 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||| || Sbjct 133269 TTGCCAGTCAGAGTCTT 133253 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || |||| |||||||| | | ||| | ||||| Sbjct 133905 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 133846 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || ||||||||||| || || ||||| || || ||||| |||||||| Sbjct 133845 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 133786 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| |||||||||||||| | |||||| || | ||||| ||| Sbjct 133785 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 133726 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 133725 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133694 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || |||||||| || ||||| | ||||| || | | || | |||||| Sbjct 127903 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCT 127962 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | ||| || ||||| || || || || |||||||| Sbjct 127963 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 128022 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| |||||||||||||| | |||||| || | ||||| ||| Sbjct 128023 TGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 128082 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 128083 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| | ||||| || || |||| ||||| || | ||| |||| || || Sbjct 128815 AGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCC 128874 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||| || ||||| || ||||| ||| Sbjct 128875 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCT 128934 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || || |||||||| |||| || || || | ||||| ||| Sbjct 128935 TGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 128994 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||| || Sbjct 128995 TTGCCAGTCAGAGTCTT 129011 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || || ||||| |||||||||| ||||| || | | || | ||||| Sbjct 134133 AGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 134074 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || |||||||| | ||| ||||| || || |||||||| ||||||||| Sbjct 134073 TCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCT 134014 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| |||||||||| || || || | ||||| ||| Sbjct 134013 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 133954 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 133953 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||| || || |||| ||||| || | | || | || ||||| |||||||| || Sbjct 133662 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCG 133603 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | |||||||||||| || || || || |||||||| || ||||| ||| Sbjct 133602 GCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTG 133543 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| |||| || || || | ||||| |||||||| || | || Sbjct 133542 ACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 133483 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | ||||| Sbjct 133482 TTGACGAAGATCTGCAT 133466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192524018726180