Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq47 107 3e-18 >seq47 Length=84389 Score = 107 bits (118), Expect = 3e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 || || ||||| || || ||||| || |||| || || | ||||| || || ||| Sbjct 59208 AAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTG 59149 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||||||||| || ||||| || |||||||| || || | |||||||| || || ||| Sbjct 59148 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 59089 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCGTTG 48314 || || || |||||||| ||||| || || | ||| | | ||| |||||| | Sbjct 59088 AAGATACCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTGGAGTCTTCGTCG 59029 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTAC 48352 | ||||| || | ||||| || ||||| | ||| || Sbjct 59028 TTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGAC 58991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664718820800