Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq16 145 5e-30 seq136 123 2e-23 seq418 120 2e-22 seq111 114 9e-21 >seq16 Length=163030 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||||||| |||||| |||||||||||||| | || ||| | || ||| Sbjct 133902 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 133843 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| ||||| | |||||||| || | || | ||| ||||| ||| Sbjct 133842 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 133783 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | |||||||| | ||||||||||| | || || ||||| Sbjct 133782 ATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTG 133723 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||||||| |||||||| |||||| Sbjct 133722 CCGGTGAGGGTCTTGACGAAGATCTGCATG 133693 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||||||| |||||| |||||||||||||| | || ||| | || ||| Sbjct 128590 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 128649 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| ||||| | |||||||| || | || | ||| ||||| ||| Sbjct 128650 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 128709 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | |||||||| | ||||||||||| | || || ||||| Sbjct 128710 ATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTG 128769 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| |||||||||||||| ||||| Sbjct 128770 CCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| ||| ||||||||| |||||||| || | || ||| | || || Sbjct 127906 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCG 127965 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| |||||||| || | || | || ||||| ||| Sbjct 127966 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 128025 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | |||||||| | ||||||||||| | || || |||| Sbjct 128026 ATCTTCGTCTTGACATTGT--CGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCT 128083 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| ||||| || ||||| Sbjct 128084 TGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| |||||||||||||||| || ||| | || ||| Sbjct 128134 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 128193 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| |||||||| || || || || | ||| | || ||||| || Sbjct 128194 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 128253 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||||| | || || || | || || ||||| Sbjct 128254 ATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACTTCGAGAGTGATAGTCTTG 128313 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 128314 CCGGTGAGGGTCTTGACGAAGATCTGCAT 128342 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || ||||||||| |||||||| || | | | || |||| ||| Sbjct 128362 ACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCCTCC 128421 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| ||||||||||| | ||| | || ||||| ||| Sbjct 128422 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGA 128481 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || || || | || || ||||| Sbjct 128482 ATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTG 128541 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 128542 CCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| ||| ||| |||||||||||||| || | || ||| | || ||| Sbjct 134130 ACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCC 134071 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || || |||||||| ||||| ||||| | ||| | ||| ||||| || Sbjct 134070 AACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCTTGA 134011 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || || || | || || ||||| Sbjct 134010 ATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTG 133951 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 133950 CCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 114 bits (126), Expect = 9e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || | ||| || |||| || |||||||| ||||| || Sbjct 133657 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAA 133598 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| || || || || | ||| | || ||||| ||| ||||| ||| | | Sbjct 133597 GATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTT 133538 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||||| ||| || || || | || || ||||| || ||||||||||| || Sbjct 133537 GTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGAC 133478 Query 44326 GAAGATTTGCATG 44338 |||||| |||||| Sbjct 133477 GAAGATCTGCATG 133465 Score = 104 bits (114), Expect = 2e-17 Identities = 144/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| |||||||||||||||| || ||| |||| || Sbjct 133446 ACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 133387 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||| | |||||| || || | ||| | || ||||| || Sbjct 133386 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 133327 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | ||| || ||||| | || || |||| Sbjct 133326 ATCTTGGTCTTGACATTGT--CGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCT 133269 Query 44307 TTCCCGTGAGGGTCTTCACG 44326 | || || || ||||| ||| Sbjct 133268 TGCCAGTCAGAGTCTTAACG 133249 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||| |||||| ||||||||||| || | | | || |||| || Sbjct 128818 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCG 128877 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||||||| || | ||| | || ||||| || Sbjct 128878 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 128937 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | ||| || ||||| | || || ||||| Sbjct 128938 ATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 128997 Query 44309 CCCGTGAGGGTCTTCACG 44326 || || || ||||| ||| Sbjct 128998 CCAGTCAGAGTCTTGACG 129015 >seq136 Length=51868 Score = 123 bits (136), Expect = 2e-23 Identities = 147/198 (74%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 49588 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 49529 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||| || || | || | ||||||||| ||| Sbjct 49528 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCG-GGGAATACCTTCCTTGTCCTGG 49470 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||| ||||| || || ||||| | || |||||||| Sbjct 49469 ATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 49410 Query 44309 CCCGTGAGGGTCTTCACG 44326 || ||||||||||| ||| Sbjct 49409 CCGGTGAGGGTCTTGACG 49392 >seq418 Length=175290 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||| ||||||||||| || | || || |||| || Sbjct 54873 CACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 54932 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | |||||||| || | || | ||||||||| ||| Sbjct 54933 GAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 54992 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||| | | | |||| ||||| || |||||||| | || || ||||| Sbjct 54993 GATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 55052 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| |||||||| |||||||| |||||| || Sbjct 55053 ACCCGTCAGGGTCTTGACGAAGATCTGCATGCTG 55086 >seq111 Length=618870 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| || |||||||||||||| |||| || || |||| || Sbjct 410824 ACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCG 410765 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||| || || |||| || | || ||||| || Sbjct 410764 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 410705 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| ||| || ||||| | || || ||||| Sbjct 410704 ATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTG 410645 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || |||||||| |||||||| ||||||||| Sbjct 410644 CCAGTAAGGGTCTTGACGAAGATCTGCATGATG 410612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988337929990