Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq16 174 4e-38 seq418 150 4e-31 seq111 150 4e-31 seq136 132 1e-25 >seq16 Length=163030 Score = 174 bits (192), Expect = 4e-38 Identities = 164/208 (79%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| |||||||| || || || ||||| || ||||||||| |||||| Sbjct 128795 CAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGAC 128736 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 128735 ACCATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 128676 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||| | || ||||| | |||||| | ||||| ||| || Sbjct 128675 CGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATC 128616 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || ||||| || || |||| || Sbjct 128615 CAGAAGGAGTCAACGCTTCA-CTTGGTT 128589 Score = 168 bits (186), Expect = 2e-36 Identities = 158/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || ||||| |||||||||||| |||||| Sbjct 128111 CAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCAGAC 128052 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct 128051 ACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 127992 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || |||||||||||||| | || ||| | || || ||| | Sbjct 127991 CGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCGGACTACAACATT 127932 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 127931 CAAAAGGAGTCCACTCTTCAT 127911 Score = 165 bits (182), Expect = 2e-35 Identities = 162/208 (78%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| || ||||||||| |||||| Sbjct 133697 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGAC 133756 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 133757 ACCATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 133816 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||| | || ||||| | |||||| | ||||| ||| || Sbjct 133817 CGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATC 133876 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || ||||| || || |||| || Sbjct 133877 CAGAAGGAGTCAACGCTTCA-CTTGGTT 133903 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || || ||| ||| Sbjct 133469 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCCGAC 133528 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || |||||||||||||| ||| Sbjct 133529 ACTATCGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAACAA 133588 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || ||||| ||||| ||| | || || | || || ||| || Sbjct 133589 CGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAACATC 133648 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||| ||||| | ||| Sbjct 133649 CAGAAGGAGTCCACATTGCATTTGGTT 133675 Score = 154 bits (170), Expect = 4e-32 Identities = 153/197 (78%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || ||| ||||||||||| Sbjct 133249 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 133308 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| || ||||| || || |||||||||||||| || || || || Sbjct 133309 CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCAT 133368 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || || ||||| || || | || ||| ||||||| ||| |||| || || Sbjct 133369 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGA 133428 Query 178112 ATCAACACTGCATCTTG 178128 || |||||||| |||| Sbjct 133429 GTCCACACTGCA-CTTG 133444 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || || ||||| ||| Sbjct 128339 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCCGAC 128280 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| || ||||| || || || ||||||||||| ||| Sbjct 128279 ACCATTGATAACGTCAAGACGAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAACAA 128220 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || ||| | || ||||| | || ||| ||||||| ||| || Sbjct 128219 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 128160 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 128159 CAGAAGGAGTCCACTCTTCA-CTTG 128136 Score = 147 bits (162), Expect = 5e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || || ||||||| Sbjct 128567 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCAGAC 128508 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct 128507 ACTATCGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGATCAGCAG 128448 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || ||||| || || || | || | | || || ||| | Sbjct 128447 CGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGAACATTGTCGGACTACAACATT 128388 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| || ||||| ||||| |||| || Sbjct 128387 CAAAAGGAGTCAACTCTGCA-CTTGGTT 128361 Score = 131 bits (144), Expect = 4e-25 Identities = 148/197 (75%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || ||| |||||||| || Sbjct 129015 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATTGA 128956 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 |||||||| |||||| || || || || || || |||||||||||||| || || || Sbjct 128955 CAACGTCAAGACAAAGATCCAAGATAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCAT 128896 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||| ||||| || |||||||| || || | || | | || || ||| |||| || || Sbjct 128895 CTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGA 128836 Query 178112 ATCAACACTGCATCTTG 178128 || ||| |||| |||| Sbjct 128835 GTCCACATTGCA-CTTG 128820 >seq418 Length=175290 Score = 150 bits (166), Expect = 4e-31 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||||||||||||||| || ||| Sbjct 55079 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 55020 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||||||| |||||| || ||| || |||||||| ||||| ||||| ||||||||||| Sbjct 55019 TCCATCGACGCCGTCAAGACCAAA-ATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCA 54961 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 ||||| ||||||||||| || |||||||| || || | |||||| | || || ||| | Sbjct 54960 GCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACAT 54901 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 54900 CCAGAAGGAGTCGACTCTCCACCTCGT 54874 >seq111 Length=618870 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| || ||| ||| Sbjct 410619 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCCGAC 410678 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| || ||||| || || ||||| || ||||| ||| Sbjct 410679 ACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAACAA 410738 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||||||||| || | || || |||| || ||| || Sbjct 410739 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAACATC 410798 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || || || Sbjct 410799 CAAAAAGAATCCACCCTCCACCTCGT 410824 >seq136 Length=51868 Score = 132 bits (146), Expect = 1e-25 Identities = 149/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || || ||||| || || ||||||||||||||||| || || ||| ||||||| Sbjct 49392 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 49451 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 |||||| ||||| |||||||| ||||| || || |||||||| || || || || Sbjct 49452 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCC-CCGGACCAACAGCGTCTCAT 49510 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || |||||||| || || | ||||| |||| || ||| |||| || || Sbjct 49511 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGA 49570 Query 178112 ATCAACACTGCATCTTG 178128 || || || || |||| Sbjct 49571 GTCCACTCTTCA-CTTG 49586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723951281180