Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq6382 116 3e-21 seq3785 113 4e-20 seq7298 107 2e-18 seq2372 95.1 1e-14 seq6491 93.3 4e-14 seq8196 82.4 6e-11 >seq6382 Length=53231 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | ||||||||||||||||||||| ||||||| Sbjct 362 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 303 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || ||||| |||||||| | || | || |||||||||| ||| Sbjct 302 AGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGG 243 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| || || | ||| Sbjct 242 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 183 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | || ||||| || || ||||| Sbjct 182 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 >seq3785 Length=5141 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| ||||| ||||||||||| || ||||| ||||||| | Sbjct 566 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAC 625 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || ||||||| ||||| ||||| ||| | || || | |||||||||| || Sbjct 626 AATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGA 685 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || ||||||| || || | | | | || || || ||| Sbjct 686 ATGCCCTCCTTATCTTGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 745 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 || | ||| ||||||||||| || | || ||||| Sbjct 746 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 780 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||||||||||| || ||||| ||||| | Sbjct 4970 CCACCGCGGAGACGGAGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4911 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || ||||||| ||||| || || || | ||||| | |||||||||| || Sbjct 4910 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGG 4851 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || | || | Sbjct 4850 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACT 4791 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | || ||||| || || ||||| Sbjct 4790 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| |||| |||||||||||||| ||||| || || | Sbjct 4742 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAA 4683 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| || || ||||| || | || || | |||||||||| || Sbjct 4682 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 4623 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | ||| |||||||| |||||| Sbjct 4622 ATGCCCTCCTTGTCTTGGATCTT 4600 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| || | || |||||||| || ||||| || || | Sbjct 338 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 397 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||| ||| ||||| || | ||||| | |||||||||| ||| Sbjct 398 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 457 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| || || | ||| Sbjct 458 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACC 517 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | || || || || || ||||| Sbjct 518 TCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 564 >seq7298 Length=1044 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| |||||| ||||||||||| || ||||| ||||||| Sbjct 106 CCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAG 165 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| || ||||| ||||| || | || | || || |||||| || Sbjct 166 AGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGG 225 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| ||| || || ||| | Sbjct 226 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACTCAACT 285 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || || ||||| Sbjct 286 TCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 332 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| |||| ||||||||||| || ||||| || || | Sbjct 334 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAA 393 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| || || ||||| || | || || | ||| |||||| || Sbjct 394 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 453 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 454 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACC 513 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 514 TCGAGGGTGATGGTCTTGCCAGT 536 >seq2372 Length=9363 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||| | |||||||| ||||| ||||| ||||| | Sbjct 227 CCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAA 168 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||| ||| |||||||| | || | || ||| || ||| || Sbjct 167 AGGGTGCGGCCATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGA 108 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | ||| ||| || || ||| | Sbjct 107 ATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACT 48 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || || ||||| Sbjct 47 TCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1 >seq6491 Length=17318 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||| |||||||| || ||||| ||||||| Sbjct 4927 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 4986 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || |||| |||||||||| ||| Sbjct 4987 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 5046 Query 21069 ACGCCTTCCTTGTC 21082 | ||||||||||| Sbjct 5047 ATACCTTCCTTGTC 5060 >seq8196 Length=29145 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 |||| || ||| |||| || | |||||||||||| || ||||| ||||| | || || Sbjct 8807 CGCA-CCGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 8749 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCT 21074 | ||||||| ||||| ||||| || | || || | ||| |||||| ||| | ||| Sbjct 8748 CGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCT 8689 Query 21075 TCCTTGTCGGCGATCTT 21091 |||||||| |||||| Sbjct 8688 TCCTTGTCCTGGATCTT 8672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422213886969380