Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq3785 125 5e-24 seq8729 122 6e-23 seq6491 111 1e-19 seq4088 109 4e-19 seq6382 102 5e-17 seq8196 100 2e-16 seq7298 95.1 8e-15 seq2372 93.3 3e-14 >seq3785 Length=5141 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || |||| ||| | || || ||||| |||||||| || || Sbjct 338 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 397 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| ||||| || || ||||||||||| ||| Sbjct 398 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 457 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | ||||| || Sbjct 458 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACC 517 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||||||||| ||||| ||||||||||| Sbjct 518 TCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 564 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | || || ||||| |||||||||||||| Sbjct 4970 CCACCGCGGAGACGGAGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4911 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| || || ||||||||||| || Sbjct 4910 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGG 4851 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | |||| || | ||||| || Sbjct 4850 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACT 4791 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || || || ||||||||||| Sbjct 4790 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || |||| ||| | || || ||||| |||||||| || || Sbjct 94 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 153 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| ||||| || || ||||||||||| ||| Sbjct 154 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 213 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | ||||| || Sbjct 214 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACC 273 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAG 34368 || | |||||||| ||||||||||| Sbjct 274 TCAAGAGTGATGGTCTTGCCGGTGAG 299 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||| ||| || || || ||||| ||||||||||| ||| Sbjct 566 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAC 625 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| |||| || | ||||||||| || || ||||| ||||||||||| || Sbjct 626 AATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGA 685 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || |||||| ||| | | | | || | || | || || || Sbjct 686 ATGCCCTCCTTATCTTGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 745 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| ||||| || ||||| || || Sbjct 746 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 780 Score = 87.8 bits (96), Expect = 1e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34229 CGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTC 34288 ||| | || |||||||||||||| ||||| || | || || ||||| || | || | Sbjct 5132 CGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGGTGTTGGTCCGGAGGGATGCCC 5073 Query 34289 TCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACC 34348 |||||||| ||||| ||| | | | | |||| |||| || || || || | Sbjct 5072 TCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGGACTCCACCTCAAGA 5013 Query 34349 GTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| ||||||||||| || || || ||||||||||| Sbjct 5012 GTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 4972 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||| ||| | || || || || |||||||| ||||| Sbjct 4742 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAA 4683 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||||| ||||| ||||| ||||||||||| || Sbjct 4682 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 4623 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | || || || Sbjct 4622 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACC 4563 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| ||||| || ||||| || || Sbjct 4562 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 4528 >seq8729 Length=33442 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | || |||||| || |||||||||||||| Sbjct 30280 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30221 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | ||||||||| ||||| ||||| || || ||||| ||| Sbjct 30220 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 30161 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| |||| || || || Sbjct 30160 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 30101 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| || || || || || ||||||||||| Sbjct 30100 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 30054 >seq6491 Length=17318 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | ||| || ||||| ||||||||||| || Sbjct 4927 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 4986 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 4987 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 5046 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | |||||||| || ||||| ||| | || | || || |||| || || | Sbjct 5047 ATACCTTCCTTGTC--CTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCA 5104 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||| || || || || || || || || ||||||||||| Sbjct 5105 CCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 5153 >seq4088 Length=15668 Score = 109 bits (120), Expect = 4e-19 Identities = 164/229 (72%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || || ||||| | || ||| ||||||| |||||||||||||| Sbjct 9197 CCGCCACGCAGACGAAGGACAAGGTGGAGAG-ACT--CTTTCTGGATGTTGTAGTCGGAG 9141 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 || ||| |||| || | |||||||| ||||| || || ||||| ||||| || || Sbjct 9140 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 9081 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| ||||| || | | | |||| ||| | || |||| Sbjct 9080 G--TGCCTTCCTTGTCCTGGATCTTGGTCTGGCCGTTGTCGATCGTATCTGATGAATCGA 9023 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||||| ||||||||||| || || || ||||||||||| Sbjct 9022 CTTCAAGAGTGATGGCCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 8974 >seq6382 Length=53231 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || ||||||||||| || || ||| | || || | ||||||||| ||||| Sbjct 326 TCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAG 267 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||||||||| ||| | || ||||||||| ||||| ||| | || | Sbjct 266 ATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTG 207 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | ||||| || || | |||||||| ||||||||||| || || || Sbjct 206 TCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACG 147 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 146 AAAATCTGCAT 136 >seq8196 Length=29145 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| || ||||| |||||||||||||| || || |||| Sbjct 8799 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 8740 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| ||||| ||||| ||| | | |||||||| Sbjct 8739 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCC 8680 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || || |||| ||| ||||| || | ||||| || Sbjct 8679 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 8620 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 ||||||||||| || || || Sbjct 8619 TTGCCGGTGAGGGTCTTGAC 8600 >seq7298 Length=1044 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||| || || || || ||||| ||||||||||| || Sbjct 106 CCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAG 165 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| || | || || ||||| || Sbjct 166 AGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGG 225 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| || || || Sbjct 226 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACTCAACT 285 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||||||||| || || || ||||||||||| Sbjct 286 TCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 332 >seq2372 Length=9363 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || ||||||||||| || || ||| | || |||||||||||||| ||||| Sbjct 191 TCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCCGCGAAG 132 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||| || || || | | ||||||||| ||||| ||| | | | Sbjct 131 ATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTG 72 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| || | ||||| || ||||||||||| || || || Sbjct 71 TCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACG 12 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 11 AAGATCTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323037330840800