Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4834 109 1e-18 seq248 87.8 4e-12 >seq4834 Length=10274 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| || || || |||||||| || | ||||| ||||| |||||| Sbjct 9153 GTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGG 9212 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| |||||||||| |||||| ||| |||| | ||| Sbjct 9213 CTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGAC 9272 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || ||||||||| ||| |||| || Sbjct 9273 GAGGGTCTGCACACCGACTTTGCTTGCTTGCTCTT 9307 >seq248 Length=52618 Score = 87.8 bits (96), Expect = 4e-12 Identities = 176/261 (67%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||||| || ||||| |||||| ||| || || ||| ||||| || || Sbjct 27514 GTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTA 27455 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGT 94898 || || || || || || | | | | ||||||||||| || | ||| || | Sbjct 27454 GATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTT 27395 Query 94899 GACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAG 94958 | ||| ||| || || || |||||||| |||||||| || || | | ||||||||| Sbjct 27394 GGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAG 27335 Query 94959 ATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 | || || || ||| | | |||| ||||| ||||||||||| || ||||| Sbjct 27334 GTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCAT 27275 Query 95019 AATCATGTCCTGAGGGCGCTC 95039 | ||||| || |||||||| Sbjct 27274 GAGCATGTGTTGGGGGCGCTC 27254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989472361008775