Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4834 138 2e-27 seq248 120 4e-22 >seq4834 Length=10274 Score = 138 bits (152), Expect = 2e-27 Identities = 126/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||||||||||||||||| || || || |||||||| || || Sbjct 9302 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 9243 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| |||||||| || |||||||| || ||||| || ||||| || || || || || || Sbjct 9242 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 9183 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 |||||| || ||||| || ||||||||||| || | ||| Sbjct 9182 GAAGATACCCTCTACGGCAGCAAAGGCAACCAGGCGCTC 9144 >seq248 Length=52618 Score = 120 bits (132), Expect = 4e-22 Identities = 216/316 (68%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||||| | | || || || || | || ||||||| |||| Sbjct 27864 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 27805 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 |||||||| | | | ||||| ||||| || | ||||| |||||||| || || Sbjct 27804 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 27745 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | || || |||||| || || ||||| | || ||||||||| | | Sbjct 27744 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 27685 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||||| ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 27684 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCC 27625 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | ||| | ||||||||| || | || | | ||| || | ||||| || || Sbjct 27624 TGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAG 27565 Query 80161 GTACCATTGGTCCCGG 80176 ||| || || |||| Sbjct 27564 ACACCGTTAGTTCCGG 27549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718189745540200