Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq248 149 9e-31 seq6325 127 3e-24 seq4834 122 1e-22 >seq248 Length=52618 Score = 149 bits (164), Expect = 9e-31 Identities = 314/463 (68%), Gaps = 8/463 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || ||||| || | ||| ||||| | || || |||||| | ||| Sbjct 27623 CAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCATCTACATTGAGCCCTGGCACTCTGAC 27682 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| ||| || |||| |||||| | || Sbjct 27683 GTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAG 27742 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC-AACG--ACGGTGGC 97052 | || || || || ||| | || || |||||||||||||| ||| ||| |||| | Sbjct 27743 CTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAACAGAACGGAG-- 27800 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | ||| || |||||||||| || |||||||| | ||| || ||||| ||| Sbjct 27801 -AGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAG 27859 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGA-GACGAGTCGATGC 97171 || ||||| ||| | ||||||| ||||| || | | | || ||| | || Sbjct 27860 TTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGC 27918 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | | || ||| | ||| | | ||||||| |||||||| | || | ||| || Sbjct 27919 CCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAACCCTTTCATGCT 27978 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||| | | || ||||| |||||| || | |||||||||||| |||| Sbjct 27979 TTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGCACCATCAAGTGCTC 28038 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||| ||||||||||| || | |||||| | ||||||| ||| Sbjct 28039 CAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAG 28081 >seq6325 Length=43891 Score = 127 bits (140), Expect = 3e-24 Identities = 397/610 (65%), Gaps = 26/610 (4%) Strand=Plus/Plus Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161 |||||| | ||||| | ||||| || ||||| | |||||||||||| || || || ||| Sbjct 13681 TTGCGGAAGAAGATCAGACCGGCCCGGGGACCACGGAGAGTCTTGTGGGTGGTGGTAGTC 13740 Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCA-AT 127220 || | ||| || ||||| |||||| | |||| | | | |||| | || ||| | || Sbjct 13741 ACGACGTCGCAGTACTCGAAGGGGTTCGCGTTGACCTGGGCAGCAA-CGAGACCGGAGAT 13799 Query 127221 GTGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCT 127280 ||| || || ||| ||| || | ||| | || | ||| ||||| || || | Sbjct 13800 GTGGGCCATGTCGCACATGAGGAGCGAGTTGCTCGCCTTGGCGATCTCGGAGAGACGCTT 13859 Query 127281 ATAGTCCAAGCGCCGAGGATAGCAACTGGT--GCCGGCTATGATTAGCCTAGGTTTGAAT 127338 |||||| || ||||| || | | | | |||| ||||| ||| | || | | Sbjct 13860 GTAGTCCCAGTCACGAGGGTA--AGCGGATCCACCGGAGATGATGAGCTTGGGACGGTAG 13917 Query 127339 AGATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTG 127398 |||| || ||||||| || || | ||||||| ||| || |||| || | |||||| Sbjct 13918 AGATCAGCGTTCTCGGCCAGCTTCTCGTAGTCGAGGAGACCTGTCTTGGGGTTGACCTTG 13977 Query 127399 TACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACACGTT-------GCGGAAT----- 127446 || || | | | ||| ||| |||| ||| | ||| | || | Sbjct 13978 TAAGGGAAGGCCTGGAAGTAGATGGATGATGCGCTGATGTTCTTCTTGGGGGTGTAGGCG 14037 Query 127447 CCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTA 127506 ||||| || ||||| || ||||||| || | ||| |||||||| | | || | Sbjct 14038 CCGTGGGTGAGGTGACCACCGTCGGAGAGCTTGAGACCCATGATGCGCTCAAAGGGCTGG 14097 Query 127507 ACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACT 127566 | || | ||| | |||||||||||||| | ||||| | ||| || || || || Sbjct 14098 AGGAAGGCGGTGAAGACGGCAAAGTTGGCGGTAGAGCCGGCGTAAGGCTGGACGTTGACA 14157 Query 127567 CCCCA----TTCGGACTCGTTCAAATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCAG 127622 ||||| || || || | ||||| || ||||| || ||||| | || | Sbjct 14158 CCCCAGATCTTAGG----GTCGAGGTTGAAAGCCTTGAGAGCGCGTTGCTGGGTGAGGAT 14213 Query 127623 TTCGATGCGATCGATAAACTCGTTACCACCATAGTATCGCTTTCCGGGCCTACCCTCCGA 127682 |||| ||||| |||||||||||| ||||| || |||||| |||||| || Sbjct 14214 CTCGAGCTTGTCGATGTGCTCGTTACCACCGTAGTAGCGTGCGCCGGGCAGACCCTCTGA 14273 Query 127683 GTACTTGTTG 127692 |||||||||| Sbjct 14274 GTACTTGTTG 14283 >seq4834 Length=10274 Score = 122 bits (134), Expect = 1e-22 Identities = 220/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||||| || | ||||| || || |||| ||||||||||| || Sbjct 8982 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 9041 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCC-GTCTATACGTAAAAAGGC 125374 || || | || ||||| |||| || || || | || ||| | | |||| ||| Sbjct 9042 CAGCGCGAGTAC---CTCTTCGACGCGATGGAGACCATTCCCGTCGTCAAGCAAAA-GGC 9097 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | |||| | || |||||| | ||||| | || | | ||||| | ||||| || Sbjct 9098 CGAGTGGGCCCTGCGCTGGATCAACGACGAAGACTCCACCTTTGCCGAGCGCCTGGTTGC 9157 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || || ||||||||||| |||||||| || || ||| || ||||||| |||||||| Sbjct 9158 CTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 9217 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || ||||||||||| || || | |||||| | || ||||||||||| Sbjct 9218 GAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGG 9277 Query 125555 CCTACACTGTGACTTTGC 125572 || ||| |||||||| Sbjct 9278 TCTGCACACCGACTTTGC 9295 Score = 118 bits (130), Expect = 2e-21 Identities = 184/252 (73%), Gaps = 11/252 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||||| ||| ||| |||| || Sbjct 8666 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 8725 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| || |||| ||||| | |||| || | |||||| | || || Sbjct 8726 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 8785 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| |||| || ||||| ||||||||||| || || || || || Sbjct 8786 CACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGA-GCG 8844 Query 125198 ATTC-TCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCA 125253 ||| ||| |||| | ||| | |||||| ||| ||||| ||||| |||||||||| Sbjct 8845 GTTCAGCTC-AGAG--GTCCAGGCAGCAGAGG-CTCGATGCTTCTACGGCTTCCAAATCA 8900 Query 125254 TGAT-TGAGAAC 125264 |||| |||| || Sbjct 8901 TGATGTGAGTAC 8912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740977637171800