Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq6382 111 1e-19 seq3785 98.7 8e-16 seq2372 91.5 1e-13 >seq6382 Length=53231 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || |||||||| ||| |||||||||||||||||| || | || || || | || || Sbjct 344 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA-AAGGGTGCGGCCATCTTC 286 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || | || || |||||||| ||| || | | ||||||||| Sbjct 285 GAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 226 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| ||| ||||| | | ||||| || | || ||| ||||| ||| ||||| || Sbjct 225 AATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTT 166 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || || ||||||||||| Sbjct 165 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 >seq3785 Length=5141 Score = 98.7 bits (108), Expect = 8e-16 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||||| | | || || ||||| || |||||| || ||||||||||||| Sbjct 337 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 396 Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 | | || || | ||||||| |||||| ||| || | || | |||||||| ||| | Sbjct 397 AAGAGTG-CGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGG 455 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTC 48675 | | || ||||||||| || ||| ||| | | | || ||||| || | || || Sbjct 456 GGATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCG--ATGGTGTCTGATGATTC 513 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||| | || ||||| || ||||||||||| ||||| || |||||||| Sbjct 514 CACCTCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 564 >seq2372 Length=9363 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || |||||||||||| ||| ||||| |||||||| |||| || || || | ||||| Sbjct 209 ACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAG-AAAGGGTGCGGCCATCCTC 151 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || |||||| || || | || || ||||| |||||| || | || |||||||| Sbjct 150 CAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCTTG 91 Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| || ||||| | | || || || || | ||||| |||| ||| || || Sbjct 90 AATCTTGGTCTTGACGTTGTCG--ATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 33 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || |||||||| || || || || |||||||| Sbjct 32 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421205995138805