Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2372 102 7e-17 seq3785 98.7 9e-16 seq7298 91.5 1e-13 seq6491 91.5 1e-13 seq8729 86.0 6e-12 >seq2372 Length=9363 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | || || || ||||| | ||| || || | ||| | ||||||| Sbjct 209 ACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCC 150 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || || | ||||| |||| || ||||| ||||||||||| || ||||| | | Sbjct 149 AACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCTTGA 90 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||||||| | ||| |||||| | | ||||| || | ||||| || || Sbjct 89 ATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTG 30 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 29 CCGGTGAGGGTCTTGACGAAGATCTGCAT 1 >seq3785 Length=5141 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || || ||||| || | ||| ||||| | |||| | ||||||| Sbjct 356 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 415 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || ||| | ||||| | | ||||| || || || ||||| || ||||| | Sbjct 416 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 475 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||| ||| | ||| ||||| | || || |||| |||||||| || Sbjct 476 ATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTG 535 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| ||||| ||||||||||| Sbjct 536 CCGGTGAGAGTCTTCACGAAGATCTGCAT 564 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||||||||| || || ||||| || | ||| || || || || | ||||| Sbjct 584 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCG 643 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || ||| ||||||| | | ||||| || |||||||| || || || || | Sbjct 644 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 703 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || |||| ||||||| | | | ||||| | | || || || | |||||||| || Sbjct 704 ATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 763 Query 94979 CCAGTAAGAGTTTTCAC 94995 ||||| ||||| || || Sbjct 764 CCAGTCAGAGTCTTGAC 780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| || ||| | ||||| |||| || || || ||||| || || || || Sbjct 5127 ATCCTCCAACTGCTTGCCGGCGAAGATCAATCGGTGTTGGTCCGGAGGGATGCCCTCCTT 5068 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || | ||| ||| | ||| ||||| | | || || |||| ||||| Sbjct 5067 GTCCTGGATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGGACTCCACCTCAAGAGTGAT 5008 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || || || || ||||||||||| Sbjct 5007 GGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 4972 >seq7298 Length=1044 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856 ||||| ||||| || || ||||| || | ||| || || | || || | || | Sbjct 124 ACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCG--TCTT 181 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || ||| | ||||| |||| ||| || || ||||| || || || ||||| | Sbjct 182 CAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCT 241 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || | ||||||| | ||| |||||| | | || || || | ||||| || | Sbjct 242 GAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCT 301 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || || || || || || ||||||||||||| Sbjct 302 TGCCGGTGAGGGTCTTGACGAAGATCTGCATGC 334 >seq6491 Length=17318 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | || ||||| || || || |||||||| ||| Sbjct 4999 TCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTG 5058 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| | |||||||||| ||| | ||| | || || || | ||||| Sbjct 5059 TCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATA 5118 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || || || || || || || |||||||||||||| Sbjct 5119 GTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATGCT 5156 >seq8729 Length=33442 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868 || ||||| ||||| | ||| || ||| |||| ||| | || || ||||| || | Sbjct 30250 GTGGATTCTTTTTGGATGTTGTAGTCGG--ATAGCGTTCGGCCGTCTTCGAGCTGCTTGC 30193 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | ||||| | | ||| || ||||| || || || || ||||| | || || | || Sbjct 30192 CGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCT 30133 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 ||||| | | | ||||| | | || || || | |||||||| || |||||||| | Sbjct 30132 TGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCAGTAAGGG 30073 Query 94989 TTTTCACAAAGATCTGCATG 95008 | || || |||||||||||| Sbjct 30072 TCTTGACGAAGATCTGCATG 30053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448241859949800