Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1002 165 1e-36 >seq1002 Length=22269 Score = 165 bits (182), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||| |||||| || ||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 1333 CAGAT-TCTTCGTGACAACATCCAAGGTATCACTAAGCCCGCAATCCGCCGTCTCGCTCG 1275 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| |||| || | |||| || |||| || | ||| | || Sbjct 1274 TCGTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTACGACGAGACCCGCGGTGTCCTCAA 1215 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || |||| || | ||| | || ||| ||||||||||| || || || Sbjct 1214 GCTCTTCCTCGAGTCCGTCATTCGTGACTCAGTCACCTACACCGAGCACGCCAAGCGCAA 1155 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||||| || | || ||||||| || | || || || ||||| Sbjct 1154 GACTGTCACTTCTCTCGACGTCGTCTACGCTCTCAAGCGCCAGGGCCG 1107 Score = 96.9 bits (106), Expect = 5e-16 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 16509 GTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGA 16568 ||||||| ||||||||| |||| || | |||| || |||| || | ||| | ||| Sbjct 1104 GTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTACGACGAGACCCGCGGTGTCCTCAAGC 1045 Query 16569 TCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGA 16628 |||||||| || |||| || | ||| | || ||| ||||||||||| || || |||| Sbjct 1044 TCTTCCTCGAGTCCGTCATTCGTGACTCAGTCACCTACACCGAGCACGCCAAGCGCAAGA 985 Query 16629 CTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||| || | || ||||||| || | || || || ||||| Sbjct 984 CTGTCACTTCTCTCGACGTCGTCTACGCTCTCAAGCGCCAGGGCCG 939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79067149526865