Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq248 181 3e-40 >seq248 Length=52618 Score = 181 bits (200), Expect = 3e-40 Identities = 496/752 (66%), Gaps = 6/752 (1%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || || | | ||| ||||| || | || || || ||||| || Sbjct 27353 TTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCG 27412 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | ||||||||||| || ||||| || |||| ||||| || |||| Sbjct 27413 TGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACC 27472 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || | || ||||| || || || || || | |||||| | |||| Sbjct 27473 TGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGT 27532 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | |||||| ||| || || ||| || || | || || |||||||| Sbjct 27533 ACCGG-CTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCG 27591 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 || || |||| || || | |||||||| |||||||| ||||| ||| || || Sbjct 27592 CGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGTGCCTT 27651 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || || || | ||||| || | || | || ||||| || || ||| |||| || Sbjct 27652 CGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAA 27711 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || ||||| | || || ||||| || ||||| || |||||| | ||||| Sbjct 27712 CCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTT 27771 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||||| || || ||| || | ||||| || | ||||| || || | Sbjct 27772 GTTCATGAAGCGAGTCGAA-CAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCC 27830 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | ||||| | ||||| | || ||||| | | ||||| ||||| ||||| || | Sbjct 27831 CCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTG 27890 Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 |||| ||||| || | || || ||||| |||| ||| | | || | | Sbjct 27891 AGGGTCGTGCTCGCCGAACCGTCAAGGCCCAAAAGCTTTGGTACGCCGTTCTCGAGGCTC 27950 Query 364145 AGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 ||| ||||| || | ||||| | ||| | ||||| || | |||||||||||| ||| Sbjct 27951 AGACGGAGACTGGCA-ACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAAC 28009 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACC 364263 || || |||| || || || || |||||| || || ||||| || || |||| | Sbjct 28010 CAAAAGAACCTCGGCACCATCAAGTGCTCCAACCTGTGCACGGAGATCATGGAGTACAGC 28069 Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGC 364295 ||||| || ||| || || || |||||||| Sbjct 28070 GCTCCGGATGAGGTCGCTGTCTGCAACCTTGC 28101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303206563385510