Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2372 93.3 4e-14 seq7298 91.5 1e-13 seq8729 86.0 5e-12 seq6382 84.2 2e-11 >seq2372 Length=9363 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || || ||||||||||| || Sbjct 1 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 60 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | ||||| |||||| ||||| || || || ||||| |||||| Sbjct 61 GACACTATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAA 120 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | || |||||||| | || |||| | | | | | || || ||| Sbjct 121 CAGCGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAAC 180 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || |||||||| || ||| ||||||| || Sbjct 181 ATCCAAAAAGAGTCCACACTTCATTTGGT 209 >seq7298 Length=1044 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || ||| |||| || ||| || ||||||||||| | ||||| Sbjct 536 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGACAATGTCAAGACC 477 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| || ||||| ||||| || |||||| | || || | || ||||||| Sbjct 476 AAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCATCTTCGCCGGCAAG 417 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 |||||||| || | | | | | | |||||| ||||| || || || || ||| | || Sbjct 416 CAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACACTGCAC 357 Query 24195 TTAGT 24199 || || Sbjct 356 TTGGT 352 >seq8729 Length=33442 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| || ||| || | Sbjct 30054 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 30113 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||||| ||||| || ||||| || || || ||| Sbjct 30114 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 30173 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | || ||||||||| |||||||| | | ||| | ||| || ||| Sbjct 30174 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 30233 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||||||||| || Sbjct 30234 ATCCAAAAAGAATCCAC 30250 >seq6382 Length=53231 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||| || ||||| || || || || Sbjct 196 GACACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 255 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | || |||||||| |||||||||| | | | | | || || ||| Sbjct 256 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCGGACTACAAC 315 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || || || ||||||| || Sbjct 316 ATTCAAAAGGAGTCCACTCTTCATTTGGT 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429889863164775