Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2372 107 2e-18 seq7298 98.7 8e-16 seq3785 98.7 8e-16 seq6382 95.1 1e-14 seq8729 82.4 6e-11 >seq2372 Length=9363 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || |||||||| ||||| ||||||||||| | | ||| | | ||| Sbjct 212 AGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 153 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || |||||||| | || | |||||||| ||| ||| | ||||| ||||| Sbjct 152 TCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCT 93 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||| | ||| || | | | | |||||| || ||| ||| | ||||| || Sbjct 92 TGAATCTTGGT-CTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGT 34 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || |||||||| Sbjct 33 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1 >seq7298 Length=1044 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || ||||||||||| | | ||| |||| Sbjct 121 AGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCT 180 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| || | || | || ||||||||| ||| | |||||| ||||| Sbjct 181 TCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 240 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||| | ||| || | | | | ||||||| || ||| ||| | ||||| || Sbjct 241 TGAATCTTGGT-CTTGACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGT 299 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || |||||||| Sbjct 300 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 332 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || |||||||| |||| | ||| | ||||| Sbjct 349 AGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 408 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||| ||||| || | || || |||||||||||| ||| | |||||| ||||| Sbjct 409 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 468 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | ||||| || ||| || | ||||||||| Sbjct 469 TGGATCTTGGT-CTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGT 527 Query 16903 TTTTCCGGTCAGCGTTTTGAC 16923 || || ||||| || || || Sbjct 528 CTTGCCAGTCAGAGTCTTAAC 548 >seq3785 Length=5141 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||||| | |||| | ||||| Sbjct 4955 AGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 4896 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | ||||| ||||| |||||| ||| | |||||| ||||| Sbjct 4895 TCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCT 4836 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | ||||| | || ||| | |||||||| Sbjct 4835 TGGATCTTGGT-CTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGT 4777 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || |||||||| Sbjct 4776 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||| ||||||||||| || ||||||||||| | || ||| | ||||| Sbjct 581 AGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCC 640 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| ||| | || || ||||| |||||| ||| | |||||| || || Sbjct 641 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCT 700 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||| ||| || | | | | ||||| || ||| || | |||||||| Sbjct 701 TGGATCTTTG--TCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGG 758 Query 16902 TTTTTCCGGTCAGCGTTTTGAC 16923 | || || ||||| || ||||| Sbjct 759 TCTTGCCAGTCAGAGTCTTGAC 780 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| |||||||||||||| |||||||| |||| | ||| | ||||| Sbjct 4727 AGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 4668 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||| ||||| || | || || ||||| |||||| ||| | |||||| ||||| Sbjct 4667 TCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCT 4608 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | ||||| | ||| || | ||||||||| Sbjct 4607 TGGATCTTGGT-CTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGT 4549 Query 16903 TTTTCCGGTCAGCGTTTTGAC 16923 || || ||||| || || || Sbjct 4548 CTTGCCAGTCAGAGTCTTAAC 4528 >seq6382 Length=53231 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || |||||||||||||| ||||||||||| | | ||| | | || Sbjct 347 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCT 288 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || |||||||| | || | ||||| |||||| || | |||||| ||||| Sbjct 287 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 228 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||| || | | | | ||||| | ||| || | |||||||| Sbjct 227 TGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 168 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| ||||||||||| Sbjct 167 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 >seq8729 Length=33442 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| || ||||| ||||||||||||| | ||| | |||| || | || Sbjct 30256 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGC 30197 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC-GGCAATTTG 16851 ||||| || | || || || |||||||| || | |||||| ||||| | | ||| Sbjct 30196 TTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTG 30137 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | | |||||| || ||| || | ||||||||| || || || Sbjct 30136 GT-CTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCAGT 30078 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 30077 AAGGGTCTTGACGAAGATCTGCAT 30054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405044529626950