Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2372 134 1e-26 seq3785 132 4e-26 seq6382 116 3e-21 seq8729 114 1e-20 seq7298 113 4e-20 seq4088 93.3 4e-14 >seq2372 Length=9363 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || ||||| || || | Sbjct 1 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 60 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||||||||||||||||||||| || |||||| Sbjct 61 GACACTATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAA 120 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||||| |||||| ||||||| | || || |||||| Sbjct 121 CAGCGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAAC 180 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || |||||||| ||||| | ||||| || | || | ||||| || Sbjct 181 ATCCAAAAAGAGTCCACACTTCATTTGGTCCTCCGTCTCCGCGGTGG 227 >seq3785 Length=5141 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||||||||| |||||| | | Sbjct 564 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCA 505 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || |||||||||||||| || || || || Sbjct 504 GACACCATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 445 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||||| |||||| |||||| | || ||||||||| Sbjct 444 CAGCGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAAC 385 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || ||| | || ||||||| ||| Sbjct 384 ATCCAGAAGGAGTCAACGCTTCACTTGGTTCTTCGTCTGCGCGGTGGT 337 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||||||||| |||||| | | || ||| | ||| | | || Sbjct 296 ACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGACACCATCGACAACGTGAAGACG 237 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || || || || ||||| || |||||||| Sbjct 236 AAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGCAAG 177 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| |||||| |||||| | || ||||||||||| || || || || || | || Sbjct 176 CAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCAACGCTTCAC 117 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || ||||||| ||| Sbjct 116 TTGGTTCTTCGTCTGCGCGGTGGT 93 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| ||| | || || || || |||| ||||| || || | | || ||| | ||| Sbjct 4528 GTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCTTCAGACACCATTGAC 4587 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || |||||||||||||| ||||| || || || || || || || Sbjct 4588 AATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCATC 4647 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| || | ||||| ||||||| | |||||||||||||| ||||| || Sbjct 4648 TTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGAG 4707 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| | || || || | || |||| || ||| Sbjct 4708 TCCACACTGCACTTGGTCCTCCGCCTGCGTGGTGGT 4743 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || ||||| ||| | | Sbjct 4744 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 4803 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || |||||||||||||| || || || || || Sbjct 4804 GACACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAG 4863 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || ||||| || ||| | ||||| ||| ||| ||||||| |||||| Sbjct 4864 CAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAAC 4923 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || ||| | || | ||||| ||| Sbjct 4924 ATCCAGAAGGAGTCCACACTTCACTTGGTTCTCCGTCTCCGCGGTGGT 4971 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || || ||| | || || || || |||| || || || || || | || ||| | ||| Sbjct 780 GTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATTGAC 721 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 | |||| ||| || ||||| |||||||| ||||| || || || || || || || Sbjct 720 AACGTCAAGACAAAGATCCAAGATAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCATC 661 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 ||||||||||| ||| | ||||| ||| || | || || |||||||| || || || Sbjct 660 TTTGCCGGCAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGAG 601 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| | || || || | || |||| || ||| Sbjct 600 TCCACATTGCACTTGGTCCTCCGCCTGCGTGGTGGT 565 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||||||||| ||||| || || Sbjct 4972 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACTCTTGAGGTGGAGTCCTCC 5031 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || || || ||| Sbjct 5032 GACACGATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 5091 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 || || | || || |||||||| ||||| |||||| ||||||| Sbjct 5092 CACCGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACC 5136 >seq6382 Length=53231 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || |||| || || |||||| | | Sbjct 136 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 195 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| ||||||||||| || || || || || Sbjct 196 GACACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 255 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | || ||| ||||||| | || || |||||| Sbjct 256 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCGGACTACAAC 315 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || ||||| | ||||| || Sbjct 316 ATTCAAAAGGAGTCCACTCTTCATTTGGT 344 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 22312 GACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAG 22371 ||||||||||| ||||| || || |||||||| | || || |||||||| ||||| ||| Sbjct 1 GACAAGGAGGGCATTCCTCCGGACCAACAACGATTGATCTTCGCCGGCAAGCAGTTGGAG 60 Query 22372 GATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 ||| ||||||| | |||||||||||||| || || || ||||| | || || || | Sbjct 61 GATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 120 Query 22432 CGATTGCGCGGAGGT 22446 || | ||||| ||| Sbjct 121 CGTCTCCGCGGTGGT 135 >seq8729 Length=33442 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || || || Sbjct 30054 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 30113 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || |||||||||||||| || || || || ||| Sbjct 30114 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 30173 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||| ||| | || || ||| || | ||||| |||||| Sbjct 30174 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 30233 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||||||||||||| Sbjct 30234 ATCCAAAAAGAATCCACC 30251 >seq7298 Length=1044 Score = 113 bits (124), Expect = 4e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| ||| | || || || || |||| || || || || || | || ||| | ||| Sbjct 548 GTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGAC 489 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || |||||||||||||| || || || || ||||| ||||| || Sbjct 488 AATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCATC 429 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| || | ||||| ||||||| | |||||||||||||| || || || Sbjct 428 TTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAG 369 Query 22411 TCCAC 22415 ||||| Sbjct 368 TCCAC 364 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || ||||| || || || Sbjct 332 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCC 273 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| || || || || ||| Sbjct 272 GACACTATCGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAA 213 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| ||| | || || || ||| |||| || |||||| Sbjct 212 CAACGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAAC 153 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||||| | ||||| ||| | || |||| || || Sbjct 152 ATCCAGAAGGAGTCCACATTGCATTTGGTTCTCCGCCTGCGTGGTGG 106 >seq4088 Length=15668 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || | ||||||||||||| || | | Sbjct 8974 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGGCCATCACTCTTGAAGTCGATTCATCA 9033 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | | | || || || |||||||| || | || || || ||| Sbjct 9034 GATACGATCGACAACGGCCAGACCAAGATCCAGGACAAGGAAGGCACCCCTCCGGACCAA 9093 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| || | ||||| ||||||| ||||||| |||||| Sbjct 9094 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGACTACAAC 9153 Query 22399 ATTCAAAAAGAATC 22412 || || ||||| || Sbjct 9154 ATCCAGAAAGAGTC 9167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419682958594825