Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq248 459 5e-124 seq4834 246 6e-60 >seq248 Length=52618 Score = 459 bits (508), Expect = 5e-124 Identities = 1149/1721 (67%), Gaps = 62/1721 (4%) Strand=Plus/Minus Query 243902 AAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGT 243960 || ||| || || || || |||||| ||||| | ||||||| || ||||| || | || Sbjct 28879 AAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGT 28820 Query 243961 CTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTG 244020 |||||| | | ||||| | | ||||| | || | |||||| | |||||| ||| Sbjct 28819 CTTGTACAGTGCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGAATCGAGCCGCCGTG 28760 Query 244021 GACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGAC 244080 | | |||| || | ||| | ||||||||||| || |||| | ||| Sbjct 28759 GGCTATGATGCGGTTCTTCATCTGCTCGTTCCACAGACCTT---GCTCGACAAGCTCACG 28703 Query 244081 CAGGTGCCT---GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT 244137 ||| ||| ||| || || || ||||| || | ||||| || || ||| ||||| Sbjct 28702 CAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTT 28643 Query 244138 GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGG 244197 ||| || ||||| | || ||| || ||| || ||||| || || || || Sbjct 28642 GCTCGTGTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCGGTGGG 28583 Query 244198 CATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGG--ATGCGGAGTCTGAGC 244255 ||| || | | ||| || ||| | | ||||| | || ||| | | ||| | Sbjct 28582 CATAGGGGCGAGCAGGAGGGAGTTTCGGAGACCGTG--TGCGGCAATGTTGCGCTTGATC 28525 Query 244256 TCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGC 244315 ||| ||||||||| | | ||| || | | | || ||||| | ||| | ||| Sbjct 28524 TCGGCCCAGTCCCAGA-GTCCG-------CTGGGGGT-GACTCCCCAGAGGTCGTATTGC 28474 Query 244316 AGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCC 244375 ||| ||||||||| |||||||||||||| ||| ||||| ||| || ||| Sbjct 28473 AGCTCGCCCTTGCTGGTCGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCG 28414 Query 244376 AGCTTACAGCTCTCG-TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCAT 244434 |||| || | ||| ||||| ||||||| |||||| |||||||||||| |||| | Sbjct 28413 AGCTCGCA-CGATCGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAG 28355 Query 244435 GTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCC 244494 | ||||| | || | ||| | | ||||| |||||||| ||||||| || || Sbjct 28354 CTTCTTGGCCTCGGGGCTGTCGAACGCGTAACCCATGATCATGAAAGCGTCGGCGAGACC 28295 Query 244495 CTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGG 244554 | || ||||| |||||||| | ||| ||| ||||||| | | || ||||| || || Sbjct 28294 GTTGACTCCGATACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGG 28235 Query 244555 GTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT---GATCATGCGGACGACGTC 244611 ||| ||||| | ||||| | |||||||||||||| || | || || ||| Sbjct 28234 GTAGTAGTTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTG 28175 Query 244612 GGCCAGCAGCTGAAAGTCGTAC-TCGTAGGGATCCTCGGCGATGGTGATCCTCACA-AAC 244669 | ||| || |||||||| || | | | || | |||| | ||| || || Sbjct 28174 G---AGCTTCTTGAAGTCGTATGTCCTTGTGTTCGTGTGCGA-GTCGATGTGGACGTAAG 28119 Query 244670 TCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGG 244729 | | || || | ||||| ||||||||||| || ||||| |||| | |||||| Sbjct 28118 AAGGT-AGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCC 28060 Query 244730 ACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTG 244789 | ||||| ||||| ||||| ||||||||||||||| |||| || || || |||||| Sbjct 28059 ATGATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTG 28000 Query 244790 GCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGG 244849 |||| ||||||||||| |||||||| || || ||||| ||| || |||| Sbjct 27999 CGGTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGA 27940 Query 244850 ACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAG 244909 ||| || ||| || | |||||||| || | |||||| ||||| |||||| Sbjct 27939 ACGGCGTACCAAAGCTTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTAC 27880 Query 244910 CGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCC 244969 ||| || |||||||||||| ||| |||| || | || ||||||||| || Sbjct 27879 TTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCG 27820 Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 |||||||| || |||||| ||| | | ||| | || |||||| | ||| |||||| Sbjct 27819 GGGCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATC 27760 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCA 245087 || ||||| | |||||| || | || ||| | ||| ||| ||| ||||||||| | Sbjct 27759 CAAAGGGCGTAGAAGAGCTCACGGG--CTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 27702 Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147 | || | || || |||||||| |||||||||||| ||||||| |||| ||| || | Sbjct 27701 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTG 27642 Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGG 245203 | ||||||||||| ||||| || | | | |||||| |||||||| ||| || Sbjct 27641 GACGCTTGTTGCCACCCTGATCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAGC 27586 Query 245204 GTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG 245263 ||||||| || ||||||||| ||||| || || ||||| | ||| | || | | Sbjct 27585 ATAGGCACGATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGG 27526 Query 245264 AGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTG 245323 | | | |||| | ||| | || || || |||| ||| | ||||||| ||||| Sbjct 27525 ATGCAGTGGATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTG 27466 Query 245324 ATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGAC 245383 | ||||| ||||| || || ||| ||||||| ||| ||| ||||| || ||| Sbjct 27465 AGAGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGAC 27406 Query 245384 AGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGG 245443 | || || ||||| | | | |||||| || |||||| ||| ||||| ||||| | Sbjct 27405 ATTTGAGGGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA-CTT 27347 Query 245444 CT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAG 245502 || ||| | || ||| || | || |||||||| ||||||| ||| | Sbjct 27346 CTCCGACATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCCG 27289 Query 245503 GGCGCACCT--CATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCTTG--- 245557 ||| || |||||| |||| ||||| |||| | | || | || ||| Sbjct 27288 ACAGCAACTCGCATGAGCATGTGTTGGGGGCGCTCG--GCGACCTT----GCCGTTGATG 27235 Query 245558 ---AGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 |||| |||||||||||||| |||||||| || ||||| Sbjct 27234 CGCAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 27194 >seq4834 Length=10274 Score = 246 bits (272), Expect = 6e-60 Identities = 414/588 (70%), Gaps = 11/588 (2%) Strand=Plus/Plus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| || || || |||| ||||| | || |||| Sbjct 8982 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 9041 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | || |||||||| || ||| | ||||| | ||||| || Sbjct 9042 CAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAG 9101 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 ||||| || ||||||| | ||| | || || | |||| | ||||| |||||| Sbjct 9102 TGGGCCCTGCGCTGGATCAACGACGAAGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTT 9161 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | ||||| ||||| ||||||||||| ||| | |||||||||||||||||||||||| || Sbjct 9162 GCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAG 9221 Query 42777 -AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 ||| || |||||||| ||||||||||| ||||| ||||||||| | |||||||| || Sbjct 9222 CGTGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCT 9280 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCGAAGG 42894 ||| | |||||||| ||| | || ||| |||||||||| | | ||| | | | Sbjct 9281 GCACACCGACTTTGCTTGCTTGCTCTTC---AGCCACCTCAAGAAGCGGCCGCACCCCGA 9337 Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954 | | || | | |||||| | ||| | || || ||| ||| ||||| || | Sbjct 9338 TGTCGTTCTGCG-CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTGACCGATG 9396 Query 42955 CGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTCATGTGCAAGTACATCCAGTAC 43013 | || ||| || || ||||||||||| ||||| || ||| || |||||||| | | Sbjct 9397 CTCTTCCCTGTTCATTGATCGGCATGAACGCACGA-CTTATGAGCCAGTACATCGAATTT 9455 Query 43014 GTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCC 43072 ||||| |||| || || || | ||| || | | ||||||| | | || Sbjct 9456 GTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAG-CACTACAACGCCACAAATCC 9514 Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 ||||||||| ||||||||||||||| || | |||||||| ||||| || Sbjct 9515 CTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 9562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944235263666800