Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8795 96.9 8e-15 seq4834 84.2 5e-11 >seq8795 Length=85501 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAA--ACATCCGCAGAGGGGA 334185 || || || ||||||||||| || ||||| | | | | || | || | || |||| Sbjct 84888 TCAGAACCATCGAGATCGTGCTCGACGTA--CCATGTGCGAACCTCGTCGGGCGAAGGGA 84945 Query 334186 ACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTG 334245 | || || | |||||||||| ||| |||||||| || || || || || | ||||| Sbjct 84946 AGCCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCGTTAC 85005 Query 334246 GCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAA 334305 | ||||| |||||||| |||| |||||||| || || | |||| ||||||| Sbjct 85006 GGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGAAGAA 85065 Query 334306 TTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 85066 TCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 85114 >seq4834 Length=10274 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 || ||||||||| | ||| ||| | |||||||||||||| || || ||||| | | Sbjct 9414 ATCGGCATGAACGCACGACTTATGAGCCAGTACATCGAATTTGTCGCTGACCGACTGCTG 9473 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 | || || || | ||||| |||||| ||| || ||||| | ||| |||||| | Sbjct 9474 GTAGCCCTCGGGAACGAGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAAC 9533 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTT 243713 || ||||| ||||| || || |||||||| Sbjct 9534 ATCTCGCTGCAAGGCAAGACAAACTTCTT 9562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102755579626750