Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq248 179 4e-40 seq4834 120 4e-22 >seq248 Length=52618 Score = 179 bits (198), Expect = 4e-40 Identities = 499/757 (66%), Gaps = 19/757 (3%) Strand=Plus/Minus Query 114479 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 114538 || || || || |||| | ||||||| | | ||||||| || || ||||| |||| Sbjct 28101 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 28042 Query 114539 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 114598 || || | ||| |||||||| | ||||||||| || ||||| ||| || |||||| Sbjct 28041 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 27982 Query 114599 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATC 114657 ||||||||| | || | || |||||||| || | || ||||| || | ||| | | | Sbjct 27981 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 27922 Query 114658 GGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCT 114715 | | || | || || |||| || || ||||| ||||||||| |||||| || Sbjct 27921 TGGGCCTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 27865 Query 114716 TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGAC 114775 || ||||| || || | | || | ||| || || || | | ||||| | || ||| Sbjct 27864 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 27805 Query 114776 CATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAG 114835 || | || || || || ||||||||||| | ||| |||||||| || || ||||| Sbjct 27804 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 27745 Query 114836 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 114895 || || || || | || || | || || || | | || | || || | | Sbjct 27744 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 27685 Query 114896 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCA 114949 | || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 27684 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCA 27628 Query 114950 GCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCA 115009 |||| | || || | || ||| || || ||||||||||| || | |||||| | | Sbjct 27627 CCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 27568 Query 115010 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCA 115067 || || || || || || || ||| | | | | || ||||||| | Sbjct 27567 GAGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTGA 27510 Query 115068 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 115127 || || || || ||| ||| ||| ||||| | ||||| || ||||||| | Sbjct 27509 GGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGC 27450 Query 115128 CGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 115187 ||||||||||||| |||| | | || |||||||| |||||||| || | |||| Sbjct 27449 CGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTG 27390 Query 115188 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 ||||||||||||||||||| || | || ||| |||| Sbjct 27389 TACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA 27353 >seq4834 Length=10274 Score = 120 bits (132), Expect = 4e-22 Identities = 176/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| ||||||||||| ||| |||||| || || |||||| || || Sbjct 9295 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 9236 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||||||||| |||||||| | |||||| || | || || || ||||||||||| Sbjct 9235 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 9176 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAA 126225 ||||| || || || |||| || ||||| ||||||| | | | ||| || || | Sbjct 9175 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCTTCGTCGTTGAT 9117 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGG-ACGGTCTGGATCGCTTCAA 126284 ||| || ||||||| ||||||| || || ||||| | ||||| ||||| || | Sbjct 9116 CCAGCGCAGGGCCCACTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATCGCGTCGA 9058 Query 126285 AGAG 126288 |||| Sbjct 9057 AGAG 9054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597287853769400