Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6382 120 3e-22 seq7298 118 1e-21 seq6491 114 1e-20 seq3785 111 2e-19 >seq6382 Length=53231 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||||||||| ||||| || | || || || | || || Sbjct 344 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCG 285 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || | |||||||||||| | || | || |||||||||| || Sbjct 284 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TG 226 Query 42120 ATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | || || |||| | | | ||||| |||||||| |||| |||||||| || Sbjct 225 AATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTT 166 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| || || || ||||| Sbjct 165 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 >seq7298 Length=1044 Score = 118 bits (130), Expect = 1e-21 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||||||||||||| |||||| || || ||||| || | || || || |||| || Sbjct 124 ACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCA 183 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || | ||| || ||||| | || | || |||||||||| || Sbjct 184 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCC-TG 242 Query 42120 ATTTTTTGT-TTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 | | || || |||| ||| | | | |||||| || || || |||| ||||| || | Sbjct 243 AATCTTGGTCTTGA-CGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCT 301 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || ||||| || ||||| ||||| Sbjct 302 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 332 >seq6491 Length=17318 Score = 114 bits (126), Expect = 1e-20 Identities = 143/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 4962 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 5021 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA--GC 42134 ||||||||||||||||| | || | | ||||||||| |||||| |||| || Sbjct 5022 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 5081 Query 42135 GTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 |||| | | |||| || ||||| |||| ||||| || || ||||| || ||||| Sbjct 5082 GTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTG 5139 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 5140 ACGAAGATCTGCAT 5153 >seq3785 Length=5141 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | |||| |||||| || || ||||| || | || || || |||| || Sbjct 4952 ACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 4893 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || || ||||||||||| | || | || ||||||||| | Sbjct 4892 AGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 4833 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || |||| | | | |||||| ||||| || |||| |||||||| ||| Sbjct 4832 ATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTG 4773 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| || ||||| ||||| Sbjct 4772 CCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||||| ||||| || | || || | |||||| || ||||| Sbjct 373 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 432 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| || | || || | ||| Sbjct 433 GATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC-TGGATCTTCGTCTTCACGT 491 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| |||||||| || | |||||||| ||||| || || ||||| | Sbjct 492 TGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCA 551 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 552 CGAAGATCTGCAT 564 Score = 102 bits (112), Expect = 9e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| ||||||||| |||||| || || ||||| || | || || || |||| || Sbjct 584 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCG 643 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || || || ||||| ||||||||||| | || | || |||||| || | Sbjct 644 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 703 Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 || ||| |||| ||| | | | ||||| || || || |||| |||||||| || Sbjct 704 ATCTTTGTCTTGA-CGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTT 762 Query 42179 GCCCGTTAGCGTCTTTAC 42196 ||| || || ||||| || Sbjct 763 GCCAGTCAGAGTCTTGAC 780 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| |||| |||| ||||||||| || |||||||| | || || || |||| || Sbjct 4724 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 4665 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||| || ||||| ||||| ||||||||||| | || | || ||||||||| | Sbjct 4664 AGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 4605 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || |||| | | | ||||| || || || || | |||||||| ||| Sbjct 4604 ATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTG 4545 Query 42180 CCCGTTAGCGTCTTTAC 42196 || || || ||||| || Sbjct 4544 CCAGTCAGAGTCTTAAC 4528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/179 (72%), Gaps = 3/179 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||||| ||||| || | || || | |||||| || ||||| Sbjct 129 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 188 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| || | || || | ||| Sbjct 189 GATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC-TGGATCTTCGTCTTCACGT 247 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGC-GTCTT 42193 | | | ||||| |||||||| || | |||||||| ||||| || || ||||| Sbjct 248 TGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGNTGTCTT 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543153012641200