Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq248 242 4e-59 >seq248 Length=52618 Score = 242 bits (268), Expect = 4e-59 Identities = 998/1551 (64%), Gaps = 41/1551 (3%) Strand=Plus/Plus Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 ||||| || |||| ||||| |||||||| || || || || || ||||| ||||| | Sbjct 27358 CCATG-CCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCT 27416 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 ||||| | || | |||| |||||| ||| ||| || | ||||| |||||| ||| | Sbjct 27417 TCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCG 27476 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | | ||| || || || || ||||| ||| ||||| | | |||| | | Sbjct 27477 CCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCG 27536 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | || ||||| ||| || || || ||| ||||| |||| |||||||| || |||| Sbjct 27537 GCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCT 27596 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 |||||||| | || |||||||| || |||||||| | | | ||| | ||||| Sbjct 27597 TCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCA 27656 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| | |||||||||||| | ||||| | ||| ||||||| | |||||||||| Sbjct 27657 TCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACG 27716 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | ||| | || ||||||||||| || ||| | || ||| | || | Sbjct 27717 GCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCA 27776 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || ||||| | ||| | ||| || | || ||| ||| || ||||| | Sbjct 27777 TGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTC 27836 Query 94367 TGTCCGACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG 94424 | | || || | || || || || || || | || | ||||| |||| Sbjct 27837 TCGCTGATGTCTACGG--CGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGG 27894 Query 94425 CAAGGC---CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGA-TCAGATCGTGGACGTAC 94480 || | | | || | | || ||||| ||| | | | || | || | | Sbjct 27895 TCGTGCTCGCCGAACCGTCA---AGGCCCAAAAGCTTTGGTACGCCGTTC-TCGAGGCTC 27950 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || |||||| || | || | ||| | | ||||||| ||| |||| |||||| |||| Sbjct 27951 AGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACC 28010 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 | || ||||||| |||||| |||| || |||||||| ||||| | ||||| | Sbjct 28011 AAAAGAACCTCGGCACCATCAAGTGCTCCAACCTGTGCACGGAGATCATGGAGTACAGCG 28070 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 ||||||| ||| | ||||| || ||||| | | || || | ||| ||| | | Sbjct 28071 CTCCGGATGAGGTCGCTGTCTGCAACCTTGCCAGTATGGCTCTACCTTCTTACGT-CCAC 28129 Query 94661 AT-GCCT---ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGA 94716 || | || ||||| || | | ||| | || |||| | || || Sbjct 28130 ATCGACTCGCACACGAACACAAGGACATACGACTTCAAGAAGCT------CCACGAGGTT 28183 Query 94717 AGGATGGTC--TTG----AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCG 94770 | | |||| ||| ||||| |||| | | ||||| |||| |||||| || || Sbjct 28184 ACCAAGGTCGTTTGTGGCAACCTCAACAAGATCATCGATGTCAACTACTACCCTGTTCCC 28243 Query 94771 GAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCG 94830 |||||| |||| || ||| || || || |||||||| ||||| ||| | ||| |||| Sbjct 28244 GAGGCGAAGAAGTCCAACATGCGCCACCGCCCCATCGGTATCGGAGTCAACGGTCTCGCC 28303 Query 94831 GACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTG 94890 ||||| | |||| ||| || | | |||| ||| || | | || | Sbjct 28304 GACGCTTTCATGATCATGGGTTACGCGTTCGACAGCCCCGAGGCCAAGAAGCTCAACATC 28363 Query 94891 AACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG 94950 | || ||||| | || || ||| || | | | ||| | | | |||| | Sbjct 28364 CAGATCTTCGAGACGATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTCGCCA---AG 28420 Query 94951 GACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTT 95009 || |||| | |||| | | || || |||| | | ||||| | || | Sbjct 28421 GAGCTCGGGACCTACGAGAC-ATACGAGGGCAGCCCGACCAGCAAGGGCGAGCTGCAATA 28479 Query 95010 CGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGAT 95067 |||||||||||| || | ||| || || | ||||||| || || | |||| | Sbjct 28480 CGACCTCTGGGGAGTCACCCCCAGCGGACTCTGGGACTGGGCCGAGATC-AAGCGC-AAC 28537 Query 95068 GTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACG 95127 || | ||||||| | |||| | || || | ||||| |||||||| || || || Sbjct 28538 ATTGCCGCACACGGTCTCCGAAACTCCCTCCTGCTCGCCCCTATGCCCACCGCTTCGACA 28597 Query 95128 GCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGG 95187 |||||||| ||| |||||||| || || || | ||| |||| | |||| | | Sbjct 28598 AGTCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGA 28657 Query 95188 CGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGA-CCTGACGTC 95246 || ||||||||||| || |||| ||| ||||| || || || || | || || Sbjct 28658 CGTGTGCTCGCCGGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGAGCTTGTCG-A 28716 Query 95247 TCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCA 95306 | ||| ||||| || || | ||||||| | || | | |||||| | || Sbjct 28717 GCAAGGTCTGTGGAACGAGCAGATGAAGAACCGCATCATAGCCCACGGCGGCTCGATTCA 28776 Query 95307 GAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCC 95366 |||| | || || || || ||||||||| || |||||||| |||||||||||| | Sbjct 28777 GAACGTGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTC 28836 Query 95367 GCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCA 95417 |||| || || ||||| || |||| ||| || |||| |||||||| Sbjct 28837 GCAGAAGGTCATCATCGACATGGCTGCCGACCGAGGTGCCTTTATCTGCCA 28887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494668749527800